RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 FARP1Q9Y4F1 1045 aaPredicted RBP27.47■■□□□ 1.99
EFNA1-202ENST00000368407 COL4A6Q14031 1691 aa27.47■■□□□ 1.99
EFNA1-202ENST00000368407 AHCYL1O43865 530 aa27.47■■□□□ 1.99
EFNA1-202ENST00000368407 FESP07332 822 aa27.47■■□□□ 1.99
EFNA1-202ENST00000368407 LINGO3P0C6S8 592 aa27.47■■□□□ 1.99
EFNA1-202ENST00000368407 CD58P19256 250 aa27.47■■□□□ 1.99
EFNA1-202ENST00000368407 ATICP31939 592 aa27.47■■□□□ 1.99
EFNA1-202ENST00000368407 TAF1BQ53T94 588 aaPredicted RBP27.47■■□□□ 1.99
EFNA1-202ENST00000368407 LVRNQ6Q4G3 990 aa27.47■■□□□ 1.99
EFNA1-202ENST00000368407 ZNF689Q96CS4 500 aaPredicted RBP27.47■■□□□ 1.99
EFNA1-202ENST00000368407 DENND2DQ9H6A0 471 aaPredicted RBP27.47■■□□□ 1.99
EFNA1-202ENST00000368407 NRDE2Q9H7Z3 1164 aa27.47■■□□□ 1.99
EFNA1-202ENST00000368407 VRTNQ9H8Y1 702 aa27.47■■□□□ 1.99
EFNA1-202ENST00000368407 RC3H2Q9HBD1 1191 aaKnown RBP27.47■■□□□ 1.99
EFNA1-202ENST00000368407 SCN1AP35498 2009 aa27.47■■□□□ 1.99
EFNA1-202ENST00000368407 E7ESA3 106 aa27.46■■□□□ 1.99
EFNA1-202ENST00000368407 F8W810 466 aa27.46■■□□□ 1.99
EFNA1-202ENST00000368407 EPHB2P29323 1055 aa27.46■■□□□ 1.99
EFNA1-202ENST00000368407 GPS1Q13098 491 aa27.46■■□□□ 1.99
EFNA1-202ENST00000368407 CUL2Q13617 745 aa27.46■■□□□ 1.99
EFNA1-202ENST00000368407 IRGCQ6NXR0 463 aa27.46■■□□□ 1.99
EFNA1-202ENST00000368407 SPOCD1Q6ZMY3 1216 aa27.46■■□□□ 1.99
EFNA1-202ENST00000368407 C4orf50Q6ZRC1 276 aa27.46■■□□□ 1.99
EFNA1-202ENST00000368407 CHSY1Q86X52 802 aa27.46■■□□□ 1.99
EFNA1-202ENST00000368407 NIPA2Q8N8Q9 360 aa27.46■■□□□ 1.99
EFNA1-202ENST00000368407 DNAJC9Q8WXX5 260 aa27.46■■□□□ 1.99
EFNA1-202ENST00000368407 ACSS3Q9H6R3 686 aa27.46■■□□□ 1.99
EFNA1-202ENST00000368407 TDRD15B5MCY1 1934 aaKnown RBP27.46■■□□□ 1.99
EFNA1-202ENST00000368407 TMEM191CA6NGB0 347 aa27.45■■□□□ 1.99
EFNA1-202ENST00000368407 CALB1P05937 261 aa27.45■■□□□ 1.99
EFNA1-202ENST00000368407 PTDSS1P48651 473 aaKnown RBP27.45■■□□□ 1.99
EFNA1-202ENST00000368407 OCRLQ01968 901 aa27.45■■□□□ 1.99
EFNA1-202ENST00000368407 ADCY1Q08828 1119 aa27.45■■□□□ 1.99
EFNA1-202ENST00000368407 CBLBQ13191 982 aa27.45■■□□□ 1.99
EFNA1-202ENST00000368407 KRT72Q14CN4 511 aa27.45■■□□□ 1.99
EFNA1-202ENST00000368407 ZNF667Q5HYK9 610 aa27.45■■□□□ 1.99
EFNA1-202ENST00000368407 C9orf50Q5SZB4 431 aa27.45■■□□□ 1.99
EFNA1-202ENST00000368407 SCARA5Q6ZMJ2 495 aa27.45■■□□□ 1.99
EFNA1-202ENST00000368407 ZNF276Q8N554 614 aa27.45■■□□□ 1.99
EFNA1-202ENST00000368407 KCNV2Q8TDN2 545 aa27.45■■□□□ 1.99
EFNA1-202ENST00000368407 FAM193BQ96PV7 902 aaPredicted RBP27.45■■□□□ 1.99
EFNA1-202ENST00000368407 MRPL9Q9BYD2 267 aaKnown RBP27.45■■□□□ 1.99
EFNA1-202ENST00000368407 NIF3L1Q9GZT8 377 aa27.45■■□□□ 1.99
EFNA1-202ENST00000368407 RABGEF1Q9UJ41 708 aa27.45■■□□□ 1.99
EFNA1-202ENST00000368407 hCG_1818297A0A087WSY0 165 aa27.45■■□□□ 1.98
EFNA1-202ENST00000368407 LSM8O95777 96 aaKnown RBP27.45■■□□□ 1.98
EFNA1-202ENST00000368407 STAU1O95793 577 aaKnown RBP27.45■■□□□ 1.98
EFNA1-202ENST00000368407 RPL9P32969 192 aaKnown RBP27.45■■□□□ 1.98
EFNA1-202ENST00000368407 LILRA4P59901 499 aa27.45■■□□□ 1.98
EFNA1-202ENST00000368407 ZRSR2Q15696 482 aaKnown RBP27.45■■□□□ 1.98
EFNA1-202ENST00000368407 C4orf33Q8N1A6 199 aa27.45■■□□□ 1.98
EFNA1-202ENST00000368407 SLC35B2Q8TB61 432 aa27.45■■□□□ 1.98
EFNA1-202ENST00000368407 MZB1Q8WU39 189 aa27.45■■□□□ 1.98
EFNA1-202ENST00000368407 MAK16Q9BXY0 300 aaKnown RBP27.45■■□□□ 1.98
EFNA1-202ENST00000368407 SLC4A7Q9Y6M7 1214 aa27.45■■□□□ 1.98
EFNA1-202ENST00000368407 KRT1P04264 644 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 MMP8P22894 467 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 GNA15P30679 374 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 VHLP40337 213 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 ASPAP45381 313 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 TAF6P49848 677 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 KLC1Q07866 573 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 HIF1AQ16665 826 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 TFDP3Q5H9I0 405 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 ZBED8Q8IZ13 594 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 LRRC43Q8N309 656 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 HASPINQ8TF76 798 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 BTBD10Q9BSF8 475 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 KIF9Q9HAQ2 790 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.44■■□□□ 1.98
EFNA1-202ENST00000368407 PTPRSQ13332 1948 aa27.44■■□□□ 1.98
EFNA1-202ENST00000368407 FNDC1Q4ZHG4 1894 aaPredicted RBP27.44■■□□□ 1.98
EFNA1-202ENST00000368407 LRRD1A4D1F6 860 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 FAM155BO75949 473 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 B3GAT3O94766 335 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 GJB5O95377 273 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 ITGB1P05556 798 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 PCK1P35558 622 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 OR1G1P47890 313 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 ARL4CP56559 192 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 NAIF1Q69YI7 327 aaPredicted RBP27.43■■□□□ 1.98
EFNA1-202ENST00000368407 POLNQ7Z5Q5 900 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 PTCD3Q96EY7 689 aaKnown RBP27.43■■□□□ 1.98
EFNA1-202ENST00000368407 ZNF560Q96MR9 790 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 SH3GL3Q99963 347 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 SLC24A3Q9HC58 644 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 PRG3Q9Y2Y8 225 aaPredicted RBP27.43■■□□□ 1.98
EFNA1-202ENST00000368407 MTO1Q9Y2Z2 717 aaKnown RBP27.43■■□□□ 1.98
EFNA1-202ENST00000368407 SNX9Q9Y5X1 595 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 TCRBV5S1A1TA0A578 114 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 CBX6O95503 412 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 PBX3P40426 434 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 PNPLA4P41247 253 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 PDIA2Q13087 525 aaKnown RBP27.43■■□□□ 1.98
EFNA1-202ENST00000368407 PIGHQ14442 188 aaPredicted RBP27.43■■□□□ 1.98
EFNA1-202ENST00000368407 FASTKD3Q14CZ7 662 aaKnown RBP27.43■■□□□ 1.98
EFNA1-202ENST00000368407 ZNF449Q6P9G9 518 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 MFSD7Q6UXD7 560 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 CD300LGQ6UXG3 332 aa27.43■■□□□ 1.98
EFNA1-202ENST00000368407 PPIL6Q8IXY8 311 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms