RNA–Protein interactions for RNA: ENST00000368358.3

HCN3-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN3, Length 3,718 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-201ENST00000368358 CHMP6Q96FZ7 201 aa13.84□□□□□ -0.19
HCN3-201ENST00000368358 AGAP3Q96P47 875 aa13.84□□□□□ -0.19
HCN3-201ENST00000368358 FTHL17Q9BXU8 183 aa13.84□□□□□ -0.19
HCN3-201ENST00000368358 TCRBV7S3A2A0A539 114 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 XPO1O14980 1071 aaKnown RBP13.83□□□□□ -0.2
HCN3-201ENST00000368358 MDM4O15151 490 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 ZNF623O75123 536 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 LTFP02788 710 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 WARSP23381 471 aaKnown RBP13.83□□□□□ -0.2
HCN3-201ENST00000368358 IVDP26440 423 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 MRPS5P82675 430 aaKnown RBP13.83□□□□□ -0.2
HCN3-201ENST00000368358 IKBKEQ14164 716 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 BOLA3Q53S33 107 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 ARHGEF18Q6ZSZ5 1173 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 ANKS4BQ8N8V4 417 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 TMEM169Q96HH4 297 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 SMC6Q96SB8 1091 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 HNRNPABQ99729 332 aaKnown RBP13.83□□□□□ -0.2
HCN3-201ENST00000368358 SMOQ99835 787 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 KANSL3Q9P2N6 904 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 CDH16O75309 829 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 GOT1P17174 413 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 MSH2P43246 934 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 PRMT2P55345 433 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 TRNP1Q6NT89 227 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 BBS12Q6ZW61 710 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 LRRTM3Q86VH5 581 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 AUTS2Q8WXX7 1259 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 FGFR1OP2Q9NVK5 253 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 TTC3P53804 2025 aa13.83□□□□□ -0.2
HCN3-201ENST00000368358 FAM107AO95990 144 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 EPHB2P29323 1055 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 DUSP4Q13115 394 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 EFTUD2Q15029 972 aaKnown RBP eCLIP13.82□□□□□ -0.21e-10■■■■■ 39.2
HCN3-201ENST00000368358 VARS2Q5ST30 1063 aaKnown RBP13.82□□□□□ -0.2
HCN3-201ENST00000368358 FAM126BQ8IXS8 530 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 PPIL6Q8IXY8 311 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 PPM1NQ8N819 430 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 HSFY1Q96LI6 401 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 GPR62Q9BZJ7 368 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 WDCPQ9H6R7 721 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 PCDH9Q9HC56 1237 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 CCDC78A2IDD5 438 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 CSF2RAP15509 400 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 CDH5P33151 784 aaPredicted RBP13.82□□□□□ -0.2
HCN3-201ENST00000368358 PHBP35232 272 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 TPI1P60174 286 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 EFEMP1Q12805 493 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 FAM133BQ5BKY9 247 aaKnown RBP13.82□□□□□ -0.2
HCN3-201ENST00000368358 INTS6LQ5JSJ4 861 aaKnown RBP13.82□□□□□ -0.2
HCN3-201ENST00000368358 PPP1R15BQ5SWA1 713 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 ERMARDQ5T6L9 678 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 DCP1BQ8IZD4 617 aaKnown RBP13.82□□□□□ -0.2
HCN3-201ENST00000368358 USP33Q8TEY7 942 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 DEPDC1BQ8WUY9 529 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 CELF6Q96J87 481 aaKnown RBP13.82□□□□□ -0.2
HCN3-201ENST00000368358 ZNF512Q96ME7 567 aaPredicted RBP13.82□□□□□ -0.2
HCN3-201ENST00000368358 SLC4A5Q9BY07 1137 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 NRDE2Q9H7Z3 1164 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 TMEM161AQ9NX61 479 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 ADAM28Q9UKQ2 775 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 CDY1Q9Y6F8 540 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 APOC4-APOC2K7ER74 178 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 SHOX2O60902 331 aaPredicted RBP13.82□□□□□ -0.2
HCN3-201ENST00000368358 APOC2P02655 101 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 IRX4P78413 519 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 GBE1Q04446 702 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 ARHGAP17Q68EM7 881 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 ZNF280DQ6N043 979 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 KDELC2Q7Z4H8 507 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 ZCCHC9Q8N567 271 aaKnown RBP13.82□□□□□ -0.2
HCN3-201ENST00000368358 TTC9BQ8N6N2 239 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 IQCGQ9H095 443 aaKnown RBP13.82□□□□□ -0.2
HCN3-201ENST00000368358 NSRP1Q9H0G5 558 aaKnown RBP13.82□□□□□ -0.2
HCN3-201ENST00000368358 RASSF4Q9H2L5 321 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 POPDC2Q9HBU9 364 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 RGS18Q9NS28 235 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 LRRC37A2A6NM11 1700 aa13.82□□□□□ -0.2
HCN3-201ENST00000368358 HOXC8P31273 242 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 HDAC4P56524 1084 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 PKN2Q16513 984 aaKnown RBP13.81□□□□□ -0.2
HCN3-201ENST00000368358 ARL13BQ3SXY8 428 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 HEATR6Q6AI08 1181 aaKnown RBP13.81□□□□□ -0.2
HCN3-201ENST00000368358 POLNQ7Z5Q5 900 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 TMEM110Q86TL2 294 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 LINC01599Q8WXQ3 324 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 PGM2Q96G03 612 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 RNF157Q96PX1 679 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 TRABDQ9H4I3 376 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 DSEQ9UL01 958 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 EEF2KO00418 725 aaKnown RBP13.81□□□□□ -0.2
HCN3-201ENST00000368358 INHBAP08476 426 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 SYN1P17600 705 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 ELF1P32519 619 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 SESN2P58004 480 aaPredicted RBP13.81□□□□□ -0.2
HCN3-201ENST00000368358 DPYSL3Q14195 570 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 STAT4Q14765 748 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 FNBP1LQ5T0N5 605 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 FBF1Q8TES7 1133 aa13.81□□□□□ -0.2
HCN3-201ENST00000368358 SEC16BQ96JE7 1060 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms