RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ETFRF1Q6IPR1 90 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 TTI2Q6NXR4 508 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 BCL7CQ8WUZ0 217 aaPredicted RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ARMC1Q9NVT9 282 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 CRABP2P29373 138 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 MMS19Q96T76 1030 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 TBC1D22BQ9NU19 505 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 SH3BP4Q9P0V3 963 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 RPS6KA6Q9UK32 745 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 FBXL21Q9UKT6 434 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 A0A0U1RQJ8 604 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 A0A1B0GVI7 797 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 KCNA5P22460 613 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 GCSHP23434 173 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 RBL2Q08999 1139 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 COL9A2Q14055 689 aaPredicted RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ADCK5Q3MIX3 580 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 CDKL3Q8IVW4 592 aaPredicted RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 CFAP206Q8IYR0 622 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ACSBG1Q96GR2 724 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 SP140LQ9H930 580 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 NFKBIL1Q9UBC1 381 aaPredicted RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 DNAJB9Q9UBS3 223 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 PROM1O43490 865 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 GRIA1P42261 906 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 PICALMQ13492 652 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ARL8AQ96BM9 186 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 TRIM51Q9BSJ1 452 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ASCC2Q9H1I8 757 aaPredicted RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ATP9BO43861 1147 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 SERPINE1P05121 402 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ITGB1P05556 798 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 DLATP10515 647 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 EXD1Q8NHP7 514 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 AIFM2Q9BRQ8 373 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 CFLARO15519 480 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 SPRP35270 261 aaPredicted RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 MADCAM1Q13477 382 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 MTMR2Q13614 643 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ABRAXAS1Q6UWZ7 409 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 MSANTD1Q6ZTZ1 278 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 NSL1Q96IY1 281 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 RMND5AQ9H871 391 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 PRG3Q9Y2Y8 225 aaPredicted RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ZSCAN5DPP0CG00 497 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 TEKQ02763 1124 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 KCNH2Q12809 1159 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 NAE1Q13564 534 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 DSG2Q14126 1118 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 FAM83EQ2M2I3 478 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 TMEM35BQ8NCS4 154 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ASAP3Q8TDY4 903 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 KRT87PA6NCN2 255 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PRLP01236 227 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 WARSP23381 471 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CALCRLQ16602 461 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GALNT7Q86SF2 657 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 RHOT1Q8IXI2 618 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 RPS6P62753 249 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ZBTB38Q8NAP3 1195 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 HEXDCQ8WVB3 486 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ADA2Q9NZK5 511 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 TAF5LO75529 589 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SLC9A9Q8IVB4 645 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PHF21AQ96BD5 680 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 MTMR10Q9NXD2 777 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ADD3Q9UEY8 706 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ZBTB1Q9Y2K1 713 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CBY3A6NI87 242 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 COPEO14579 308 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 MCCD1P59942 119 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 OSCARQ8IYS5 282 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 STK40Q8N2I9 435 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 RAB42Q8N4Z0 105 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ARHGEF26Q96DR7 871 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 STAP1Q9ULZ2 295 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ASTN1O14525 1302 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 MED24O75448 989 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CRKP46108 304 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 VAC14Q08AM6 782 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CCDC81Q6ZN84 652 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 STRADAQ7RTN6 431 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 FAM228AQ86W67 206 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PLD3Q8IV08 490 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 U2AF1L4Q8WU68 220 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 AP2M1Q96CW1 435 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ZNF668Q96K58 619 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 NT5DC2Q9H857 520 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SLC9A2Q9UBY0 812 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 TRHDEQ9UKU6 1024 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ZFYVE16Q7Z3T8 1539 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PGM3O95394 542 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CYP27A1Q02318 531 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SMYD1Q8NB12 490 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GTPBP3Q969Y2 492 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 TECPR2O15040 1411 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SLC30A4O14863 429 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 NNMTP40261 264 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 LPAR1Q92633 364 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ZSCAN10Q96SZ4 725 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms