RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 MAGEA13PA6NCF6 341 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 PRAC2D3DTV9 90 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 M0QYG6 137 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 PCDH17O14917 1159 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 ARHGEF9O43307 516 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 SGTAO43765 313 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 RECKO95980 971 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 LCATP04180 440 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 PRSS1P07477 247 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 FGRP09769 529 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 CREB1P16220 341 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF12P17014 697 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 ATF7P17544 494 aaPredicted RBP0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 KCNA3P22001 575 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 LRPAP1P30533 357 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 HOXA7P31268 230 aaPredicted RBP0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 GYS2P54840 703 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 LILRA4P59901 499 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 IL2P60568 153 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZP1P60852 638 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 MRPS5P82675 430 aaKnown RBP0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 ARID5AQ03989 594 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 SREBF2Q12772 1141 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF876PQ49A33 203 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 BROXQ5VW32 411 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 TTLL5Q6EMB2 1281 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 C19orf48Q6RUI8 117 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 LRIG3Q6UXM1 1119 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 UNQ6126/PRO20091Q6UXV3 157 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 TMEM64Q6YI46 380 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 FOXL2NBQ6ZUU3 175 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 CTU1Q7Z7A3 348 aaKnown RBP0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 LRRTM1Q86UE6 522 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 IFI44Q8TCB0 444 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 SLC5A5Q92911 643 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 LGALS12Q96DT0 336 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 BICD1Q96G01 975 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 CLMNQ96JQ2 1002 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 LINC00479Q96M42 142 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 LITAFQ99732 161 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 OPRPNQ99935 248 aaPredicted RBP0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 TINF2Q9BSI4 451 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 CDK19Q9BWU1 502 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 TANGO6Q9C0B7 1094 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 TTYH3Q9C0H2 523 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 CCDC113Q9H0I3 377 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 QRSL1Q9H0R6 528 aaKnown RBP0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 GZF1Q9H116 711 aaPredicted RBP0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 MS4A5Q9H3V2 200 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 TXNRD2Q9NNW7 524 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 CHST11Q9NPF2 352 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 CALCOCO1Q9P1Z2 691 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 MGAT4CQ9UBM8 478 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 HESX1Q9UBX0 185 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 MALT1Q9UDY8 824 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 NDRG4Q9ULP0 352 aaKnown RBP0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 DNM3Q9UQ16 869 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 SOS1Q07889 1333 aaPredicted RBP0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 SPATA31A1Q5TZJ5 1347 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 FCGBPQ9Y6R7 5405 aaPredicted RBP0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
RNU6-54P-201ENST00000365563 IGLV5-37A0A075B6J1 123 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 A0A1W2PPI3 338 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 CCDC85CA6NKD9 419 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF891A8MT65 544 aaPredicted RBP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 BECN2A8MW95 431 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 MS4A18H0YCH9 400 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 TULP2O00295 520 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 RRHO14718 337 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 FYB1O15117 783 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 RPLP2P05387 115 aaKnown RBP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 HNRNPA1P09651 372 aaKnown RBP eCLIP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 CETPP11597 493 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 CYP2C9P11712 490 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 FGF5P12034 268 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 PRKCSHP14314 528 aaPredicted RBP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 ST6GAL1P15907 406 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 ACADSP16219 412 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 KCNA5P22460 613 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 VAMP1P23763 118 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 CIITAP33076 1130 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 TIMP3P35625 211 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 PTGER3P43115 390 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 AMTP48728 403 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 PIK3CGP48736 1102 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 CLK1P49759 484 aaKnown RBP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 TOB1P50616 345 aaPredicted RBP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 JAK3P52333 1124 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 ZNF280AP59817 542 aaPredicted RBP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 TXNL4AP83876 142 aaKnown RBP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 HDLBPQ00341 1268 aaKnown RBP0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 DCAF12L2Q5VW00 463 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 PPP4R3AQ6IN85 833 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 RETSATQ6NUM9 610 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 SWSAP1Q6NVH7 229 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 TUBA1AQ71U36 451 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 USP37Q86T82 979 aa0.3□□□□□ -2.36
RNU6-54P-201ENST00000365563 RNF180Q86T96 592 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms