RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 U2AF1L5P0DN76 240 aaPredicted RBP2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 PLA2G2AP14555 144 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 BTF3P20290 206 aaKnown RBP2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 TBXAS1P24557 533 aaPredicted RBP2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 MT3P25713 68 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 IDUAP35475 653 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 DGKQP52824 942 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 U2AF1Q01081 240 aaKnown RBP eCLIP2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 MTAPQ13126 283 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 POLD3Q15054 466 aaPredicted RBP2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 ASIC2Q16515 512 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 AASDHQ4L235 1098 aaPredicted RBP2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 CXorf57Q6NSI4 855 aaKnown RBP2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 SESTD1Q86VW0 696 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 FBXL14Q8N1E6 418 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 STAG1Q8WVM7 1258 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 AKAP1Q92667 903 aaKnown RBP eCLIP2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 P2RY11Q96G91 374 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 SENP7Q9BQF6 1050 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 SELENOOQ9BVL4 669 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 RBM38Q9H0Z9 239 aaKnown RBP2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 SLC25A32Q9H2D1 315 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 THSD1Q9NS62 852 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 C1orf112Q9NSG2 853 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 TXLNGQ9NUQ3 528 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 SELENONQ9NZV5 590 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 RGS17Q9UGC6 210 aaPredicted RBP2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 ANAPC4Q9UJX5 808 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 AGO2Q9UKV8 859 aaKnown RBP2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 NOB1Q9ULX3 412 aaKnown RBP2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 PCDHB2Q9Y5E7 798 aa2.8□□□□□ -1.96
RNU4-42P-201ENST00000364738 ZNF335Q9H4Z2 1342 aaPredicted RBP2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 A0A0G2JK05 382 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 TTC34A8MYJ7 566 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 PRYO14603 147 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 KRT86O43790 486 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 MT-ND5P03915 603 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 HOXB2P14652 356 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 NDUFS1P28331 727 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 ARRB2P32121 409 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 POLD2P49005 469 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 KRT81Q14533 505 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 ACOX1Q15067 660 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 ODF3L2Q3SX64 289 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 NUGGCQ68CJ6 796 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 PPP4R4Q6NUP7 873 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 CCDC149Q6ZUS6 474 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 SKAP1Q86WV1 359 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 KAT2BQ92831 832 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 CELF1Q92879 486 aaKnown RBP2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 ATP2A3Q93084 1043 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 MIB2Q96AX9 1013 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 MSI2Q96DH6 328 aaKnown RBP2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 FAM227BQ96M60 508 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 MEIS3Q99687 375 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 TTLL2Q9BWV7 592 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 ARHGAP39Q9C0H5 1083 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 FZD3Q9NPG1 666 aa2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 IPO11Q9UI26 975 aaKnown RBP2.79□□□□□ -1.96
RNU4-42P-201ENST00000364738 KIR2DS5A0A0G2JLQ3 304 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 ANKRD62A6NC57 917 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 A6NNZ2 444 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 CYSRT1A8MQ03 144 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 H0YGN5 161 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 KIR2DS3K7RE56 304 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 SPTLC2O15270 562 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 PRPF4O43172 522 aaKnown RBP eCLIP2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 MGEA5O60502 916 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 DRD1P21728 446 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 MATN1P21941 496 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 DUSP1P28562 367 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 TNFRSF8P28908 595 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 PBX1P40424 430 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 SOX2P48431 317 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 GPS1Q13098 491 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 GAB1Q13480 694 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 DLGAP5Q15398 846 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 SMTNL2Q2TAL5 461 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 MINDY4Q4G0A6 757 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 ARHGAP29Q52LW3 1261 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 RNF220Q5VTB9 566 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 ZNF324BQ6AW86 544 aaPredicted RBP2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 CAPRIN2Q6IMN6 1127 aaKnown RBP2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 PDXDC1Q6P996 788 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 RFX6Q8HWS3 928 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 SDR16C5Q8N3Y7 309 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 SUN3Q8TAQ9 357 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 APIPQ96GX9 242 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 MSLNLQ96KJ4 702 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 SNX22Q96L94 193 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 HTATIP2Q9BUP3 242 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 GATA5Q9BWX5 397 aaPredicted RBP2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 MYLK2Q9H1R3 596 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 AAMDCQ9H7C9 122 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 HEYLQ9NQ87 328 aaPredicted RBP2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 TBC1D23Q9NUY8 699 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 CAPN11Q9UMQ6 739 aa2.78□□□□□ -1.96
RNU4-42P-201ENST00000364738 TNFRSF13BO14836 293 aaPredicted RBP2.77□□□□□ -1.97
RNU4-42P-201ENST00000364738 ATG13O75143 517 aa2.77□□□□□ -1.97
RNU4-42P-201ENST00000364738 MYF5P13349 255 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms