RNA–Protein interactions for RNA: ENST00000363690.1

RNU6-288P-201, Transcript of RNA, U6 small nuclear 288, pseudogene, humanhuman

BASIC

Gene RNU6-288P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-288P-201ENST00000363690 VPS16Q9H269 839 aa3.56□□□□□ -1.84
RNU6-288P-201ENST00000363690 NOD2Q9HC29 1040 aa3.56□□□□□ -1.84
RNU6-288P-201ENST00000363690 FSCN3Q9NQT6 498 aa3.56□□□□□ -1.84
RNU6-288P-201ENST00000363690 PI4KBQ9UBF8 816 aa3.56□□□□□ -1.84
RNU6-288P-201ENST00000363690 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.56□□□□□ -1.84
RNU6-288P-201ENST00000363690 SLC13A4Q9UKG4 626 aa3.56□□□□□ -1.84
RNU6-288P-201ENST00000363690 FZD4Q9ULV1 537 aa3.56□□□□□ -1.84
RNU6-288P-201ENST00000363690 PCDHGB3Q9Y5G1 929 aa3.56□□□□□ -1.84
RNU6-288P-201ENST00000363690 LRRFIP2Q9Y608 721 aaKnown RBP3.56□□□□□ -1.84
RNU6-288P-201ENST00000363690 COL11A2P13942 1736 aaPredicted RBP3.56□□□□□ -1.84
RNU6-288P-201ENST00000363690 A0A087X1B8 175 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 LOC105369274A0A096LPK9 316 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 LOC102723532A0A0G2JNH3 316 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 LINC00473A8K010 186 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 UBE2Q2LH0YL09 131 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 TSPAN3O60637 253 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 USP12O75317 370 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 RPP40O75818 363 aaKnown RBP3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 CER1O95813 267 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 SLC3A2P08195 630 aaKnown RBP3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 CYP3A4P08684 503 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 C6P13671 934 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 JUPP14923 745 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 ENGP17813 658 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 DRD4P21917 467 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 KLRK1P26718 216 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 MCM5P33992 734 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 DDIT3P35638 169 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 GDF5P43026 501 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 PCP4P48539 62 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 DIO1P49895 249 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 PNLIPRP1P54315 467 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 SIM1P81133 766 aaPredicted RBP3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 HOXA4Q00056 320 aaPredicted RBP3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 TLE2Q04725 743 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 SF3A3Q12874 501 aaKnown RBP eCLIP3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 LMAN2Q12907 356 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 BFSP2Q13515 415 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 PUM1Q14671 1186 aaKnown RBP eCLIP3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 ANKRD1Q15327 319 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 SMAD1Q15797 465 aaKnown RBP3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 L1TD1Q5T7N2 865 aaKnown RBP3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 NAA35Q5VZE5 725 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 CCDC70Q6NSX1 233 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 VSTM1Q6UX27 236 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 RASGRP2Q7LDG7 609 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 VRK3Q8IV63 474 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 OR4N4Q8N0Y3 316 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 TMEM57Q8N5G2 664 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 SRFBP1Q8NEF9 429 aaKnown RBP3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 SCAMP5Q8TAC9 235 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 ADAMTS18Q8TE60 1221 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 SLC22A17Q8WUG5 538 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 HMGB4Q8WW32 186 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 NEU4Q8WWR8 484 aaPredicted RBP3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 NELL1Q92832 810 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 C3orf49Q96BT1 292 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 HIC2Q96JB3 615 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 LENG8Q96PV6 779 aaPredicted RBP3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 PIGSQ96S52 555 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 UBA5Q9GZZ9 404 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 TAF1DQ9H5J8 278 aaPredicted RBP3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 CCDC134Q9H6E4 229 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 AS3MTQ9HBK9 375 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 ALG13Q9NP73 1137 aaKnown RBP3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 SEMA5BQ9P283 1151 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 PDP2Q9P2J9 529 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 DAPP1Q9UN19 280 aa3.55□□□□□ -1.84
RNU6-288P-201ENST00000363690 SPATA31A5Q5VU36 1347 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 SPATA31A6Q5VVP1 1343 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 SPATA31A7Q8IWB4 1347 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 H0Y3Z8 333 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 PROP1O75360 226 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 VNN1O95497 513 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 MT-CO3P00414 261 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 C1RP00736 705 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 ERBB2P04626 1255 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 CHRM5P08912 532 aaPredicted RBP3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 GPD1P21695 349 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 ACVRL1P37023 503 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 JAK3P52333 1124 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 GPC5P78333 572 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 TIGD6Q17RP2 521 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 AAK1Q2M2I8 961 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 CTXN3Q4LDR2 81 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 SUMO4Q6EEV6 95 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 GRHL2Q6ISB3 625 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 TRIM72Q6ZMU5 477 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 MMS22LQ6ZRQ5 1243 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 HERC6Q8IVU3 1022 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 PAF1Q8N7H5 531 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 PTGR2Q8N8N7 351 aaPredicted RBP3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 TERB1Q8NA31 727 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 IL17REQ8NFR9 667 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 SLC2A12Q8TD20 617 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 EDC3Q96F86 508 aaKnown RBP3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 UBXN10Q96LJ8 280 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 CCDC17Q96LX7 622 aa3.54□□□□□ -1.84
RNU6-288P-201ENST00000363690 CIPCQ9C0C6 399 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms