RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 DCLK3Q9C098 648 aa2.61□□□□□ -1.99
RNU6-238P-201ENST00000363313 IPO11Q9UI26 975 aaKnown RBP2.61□□□□□ -1.99
RNU6-238P-201ENST00000363313 CPA4Q9UI42 421 aa2.61□□□□□ -1.99
RNU6-238P-201ENST00000363313 ASAP1Q9ULH1 1129 aa2.61□□□□□ -1.99
RNU6-238P-201ENST00000363313 RIMKLBQ9ULI2 386 aa2.61□□□□□ -1.99
RNU6-238P-201ENST00000363313 HEMK1Q9Y5R4 338 aaPredicted RBP2.61□□□□□ -1.99
RNU6-238P-201ENST00000363313 TNKSO95271 1327 aa2.61□□□□□ -1.99
RNU6-238P-201ENST00000363313 MBD3L4A6NDZ8 208 aaPredicted RBP2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 MBD3L3A6NE82 208 aaPredicted RBP2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 AQP7P3A6NL99 342 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 C16orf96A6NNT2 1141 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 ALG1L2C9J202 215 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 AP1G1O43747 822 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 SNX2O60749 519 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 PRAMEF2O60811 474 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 DDNO94850 711 aaPredicted RBP2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 SNUPNO95149 360 aaKnown RBP2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 RASAL1O95294 804 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 MBPP02686 304 aaPredicted RBP2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 HOXA11P31270 313 aaPredicted RBP2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 IDUAP35475 653 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 SOX2P48431 317 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 RAB1AP62820 205 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 ARHGEF7Q14155 803 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 CNGA3Q16281 694 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 ODF3L2Q3SX64 289 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 ZNF672Q499Z4 452 aaPredicted RBP2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 C6orf10Q5SRN2 563 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 CEP85LQ5SZL2 805 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 NUGGCQ68CJ6 796 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 PRSS57Q6UWY2 283 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 PRR26Q8N8Z3 221 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 SMCR8Q8TEV9 937 aaPredicted RBP2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 INPP4AQ96PE3 977 aaPredicted RBP2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 CGRRF1Q99675 332 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 TTLL2Q9BWV7 592 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 SMURF2Q9HAU4 748 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 TCF7L1Q9HCS4 588 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 VPS45Q9NRW7 570 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 RXFP3Q9NSD7 469 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 SIRT3Q9NTG7 399 aaPredicted RBP2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 G3BP2Q9UN86 482 aaKnown RBP2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 DTX4Q9Y2E6 619 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 COL15A1P39059 1388 aa2.6□□□□□ -1.99
RNU6-238P-201ENST00000363313 RRP9O43818 475 aaKnown RBP2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 PPP1R3DO95685 299 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 ENO1P06733 434 aaKnown RBP2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 SP1P08047 785 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 CPA1P15085 419 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 GM2AP17900 193 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 EN2P19622 333 aaPredicted RBP2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 GALNSP34059 522 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 DGKQP52824 942 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 KIF5AQ12840 1032 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 Q5PR19 223 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 ATAT1Q5SQI0 421 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 CACHD1Q5VU97 1274 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 ADAM5Q6NVV9 412 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 PARM1Q6UWI2 310 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 USP49Q70CQ1 688 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 CELF5Q8N6W0 485 aaKnown RBP2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 FAM47BQ8NA70 645 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 PLBD2Q8NHP8 589 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 HPS3Q969F9 1004 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 GJA10Q969M2 543 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 ZBTB45Q96K62 511 aaPredicted RBP2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 MAP3K14Q99558 947 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 GTPBP4Q9BZE4 634 aaKnown RBP2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 CCDC8Q9H0W5 538 aaPredicted RBP2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 DNAJB11Q9UBS4 358 aa2.59□□□□□ -1.99
RNU6-238P-201ENST00000363313 CKAP5Q14008 2032 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 A0A1W2PPL8 197 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 SRRM3A6NNA2 597 aaPredicted RBP2.58□□□□□ -2
RNU6-238P-201ENST00000363313 FAM227AF5H4B4 570 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 SPRY3O43610 288 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 MARCH6O60337 910 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 INMTO95050 263 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 ALDH2P05091 517 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 TMEM225BP0DP42 221 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 ST6GAL1P15907 406 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 MATN1P21941 496 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 TAF6P49848 677 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 AGFG1P52594 562 aaKnown RBP2.58□□□□□ -2
RNU6-238P-201ENST00000363313 COPAP53621 1224 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 DLX5P56178 289 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 KRTAP10-3P60369 221 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 RBM39Q14498 530 aaKnown RBP2.58□□□□□ -2
RNU6-238P-201ENST00000363313 ZNF718Q3SXZ3 478 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 C16orf82Q7Z2V1 217 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 MUC20Q8N307 709 aaPredicted RBP2.58□□□□□ -2
RNU6-238P-201ENST00000363313 MPP5Q8N3R9 675 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 RFLNBQ8N5W9 214 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 METTL25Q8N6Q8 603 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 INPP5DQ92835 1189 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 CELF1Q92879 486 aaKnown RBP2.58□□□□□ -2
RNU6-238P-201ENST00000363313 HSPBAP1Q96EW2 488 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 ZNF845Q96IR2 970 aaPredicted RBP2.58□□□□□ -2
RNU6-238P-201ENST00000363313 ISCUQ9H1K1 167 aa2.58□□□□□ -2
RNU6-238P-201ENST00000363313 PLAC1Q9HBJ0 212 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms