RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 HTR3EA5X5Y0 456 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 STX16-NPEPL1H3BU86 382 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 THRAP10827 490 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 SLC18A1P54219 525 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 C21orf59P57076 290 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 ANO4Q32M45 955 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 TKFCQ3LXA3 575 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 NPNTQ6UXI9 565 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 DDI1Q8WTU0 396 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 ATP2A3Q93084 1043 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 MAML3Q96JK9 1138 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 RNPEPQ9H4A4 650 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 FAIMQ9NVQ4 179 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 CNTNAP2Q9UHC6 1331 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 PORP16435 677 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-201ENST00000361716 EIF3EP60228 445 aaKnown RBP13.09□□□□□ -0.31
VAMP1-201ENST00000361716 RELAQ04206 551 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 CYP24A1Q07973 514 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 CARTPTQ16568 116 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 LDLRAP1Q5SW96 308 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 TTC39BQ5VTQ0 682 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-201ENST00000361716 PACS1Q6VY07 963 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 DQX1Q8TE96 717 aaKnown RBP13.09□□□□□ -0.31
VAMP1-201ENST00000361716 JADE3Q92613 823 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 CMTM5Q96DZ9 223 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 PARVAQ9NVD7 372 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 EBF1Q9UH73 591 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 FZD1Q9UP38 647 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 SNX13Q9Y5W8 968 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 MCF2LO15068 1137 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 PSTPIP1O43586 416 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 CAPN15O75808 1086 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 KLHL2O95198 593 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 F7P08709 466 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-201ENST00000361716 GRM2Q14416 872 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 CES4AQ5XG92 561 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 SCARA3Q6AZY7 606 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 SP8Q8IXZ3 490 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 HACE1Q8IYU2 909 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 FBXW8Q8N3Y1 598 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 TTC16Q8NEE8 873 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 DEPDC1BQ8WUY9 529 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 C17orf50Q8WW18 174 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 MOCOSQ96EN8 888 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 KCNK16Q96T55 309 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 NGRNQ9NPE2 291 aaKnown RBP13.09□□□□□ -0.31
VAMP1-201ENST00000361716 ZNF277Q9NRM2 450 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-201ENST00000361716 GPATCH2LQ9NWQ4 482 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 SLC17A6Q9P2U8 582 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 SMCHD1A6NHR9 2005 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 TNRC6CQ9HCJ0 1690 aaKnown RBP13.09□□□□□ -0.31
VAMP1-201ENST00000361716 C1orf232A0A0U1RR37 186 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 CCDC78A2IDD5 438 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 CD48P09326 243 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 MCF2P10911 925 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 P4HA1P13674 534 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 HHIPL2Q6UWX4 724 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 SPATA18Q8TC71 538 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 PCDH9Q9HC56 1237 aa13.09□□□□□ -0.31
VAMP1-201ENST00000361716 C20orf96Q9NUD7 363 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-201ENST00000361716 TPST1O60507 370 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 ITGAXP20702 1163 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 ETV4P43268 484 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 RAP1GAPP47736 663 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 SLC1A6P48664 564 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 CSE1LP55060 971 aaKnown RBP13.08□□□□□ -0.32
VAMP1-201ENST00000361716 ART3Q13508 389 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 GPR107Q5VW38 600 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 PRAMEF18Q5VWM3 479 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 GPR141Q7Z602 305 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 SLC26A11Q86WA9 606 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 KATNAL2Q8IYT4 538 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 GFM2Q969S9 779 aaKnown RBP13.08□□□□□ -0.32
VAMP1-201ENST00000361716 COX4I2Q96KJ9 171 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 MBOAT7Q96N66 472 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 TJP2Q9UDY2 1190 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 DNAJB4Q9UDY4 337 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 PLLPQ9Y342 182 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 A0A0B4J269 797 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 K7EPI3 171 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 CPOXP36551 454 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 PCYT1AP49585 367 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 SNAPC2Q13487 334 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 BTG3Q14201 252 aaPredicted RBP13.08□□□□□ -0.32
VAMP1-201ENST00000361716 TFDP3Q5H9I0 405 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 PPM1LQ5SGD2 360 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 PERM1Q5SV97 790 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 EGFLAMQ63HQ2 1017 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 SNX32Q86XE0 403 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 TMEM130Q8N3G9 435 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 OR5B17Q8NGF7 314 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 PIWIL2Q8TC59 973 aaKnown RBP13.08□□□□□ -0.32
VAMP1-201ENST00000361716 ZNF606Q8WXB4 792 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 TRIM11Q96F44 468 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 PKP2Q99959 881 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 GPATCH1Q9BRR8 931 aaKnown RBP13.08□□□□□ -0.32
VAMP1-201ENST00000361716 OSBPL6Q9BZF3 934 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 DRC3Q9H069 523 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 FBXO40Q9UH90 709 aa13.08□□□□□ -0.32
VAMP1-201ENST00000361716 IP6K2Q9UHH9 426 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms