RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 ASH1LQ9NR48 2969 aaKnown RBP14.55□□□□□ -0.08
VPS29-201ENST00000360579 A0A1B0GVT2 93 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 A0A1W2PQH9 124 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 GOLGA8CPA6NN73 597 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 TIMM44O43615 452 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 CYBBP04839 570 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 RPN1P04843 607 aaKnown RBP14.55□□□□□ -0.08
VPS29-201ENST00000360579 RALAP11233 206 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 ABCG1P45844 678 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 NDST1P52848 882 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 COPAP53621 1224 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 CLDN10P78369 228 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 ARID5AQ03989 594 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 CAMK2BQ13554 666 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 ZNF234Q14588 700 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 GEN1Q17RS7 908 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 CLEC20AQ6ZU45 233 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 PARD3BQ8TEW8 1205 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 SNX19Q92543 992 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 COL26A1Q96A83 441 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 HNRNPABQ99729 332 aaKnown RBP14.55□□□□□ -0.08
VPS29-201ENST00000360579 SLC2A11Q9BYW1 496 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 DNAI2Q9GZS0 605 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 SDCBP2Q9H190 292 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 UPF2Q9HAU5 1272 aaKnown RBP14.55□□□□□ -0.08
VPS29-201ENST00000360579 FAM49BQ9NUQ9 324 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 CLIC5Q9NZA1 410 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 NAGPAQ9UK23 515 aa14.55□□□□□ -0.08
VPS29-201ENST00000360579 TK2O00142 265 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 MDM4O15151 490 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 PCDHGA12O60330 932 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 C4BPAP04003 597 aaKnown RBP14.54□□□□□ -0.08
VPS29-201ENST00000360579 EPHX1P07099 455 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 ADORA2BP29275 332 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 GRIA4P48058 902 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 CASP4P49662 377 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 CSNK1EP49674 416 aaKnown RBP14.54□□□□□ -0.08
VPS29-201ENST00000360579 CCT8P50990 548 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 C19orf57Q0VDD7 668 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 E2F4Q16254 413 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 KIF19Q2TAC6 998 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 FAM173BQ6P4H8 233 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 SERPINA13PQ6UXR4 307 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 UNC13DQ70J99 1090 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 GPRIN1Q7Z2K8 1008 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 CCDC186Q7Z3E2 898 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 C12orf29Q8N999 325 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 IQUBQ8NA54 791 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 IGSF8Q969P0 613 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 PIWIL1Q96J94 861 aaKnown RBP14.54□□□□□ -0.08
VPS29-201ENST00000360579 C7orf25Q9BPX7 421 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 CIPCQ9C0C6 399 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 MAGEF1Q9HAY2 307 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 NMUR1Q9HB89 426 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.54□□□□□ -0.08
VPS29-201ENST00000360579 ANKRD6Q9Y2G4 727 aa14.54□□□□□ -0.08
VPS29-201ENST00000360579 KALRNO60229 2985 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 PTPRBP23467 1997 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 LRRIQ3A6PVS8 624 aaPredicted RBP14.53□□□□□ -0.08
VPS29-201ENST00000360579 HHLA1C9JL84 531 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 DFNA5O60443 496 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 HLA-EP13747 358 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 KIF11P52732 1056 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 PTPRNQ16849 979 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 KNOP1Q1ED39 458 aaKnown RBP14.53□□□□□ -0.08
VPS29-201ENST00000360579 FAM124AQ86V42 546 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 TMPRSS12Q86WS5 348 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 OR2T3Q8NH03 318 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 PLEKHO2Q8TD55 490 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 JAKMIP2Q96AA8 810 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 CYFIP2Q96F07 1278 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 USP28Q96RU2 1077 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 LHX5Q9H2C1 402 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 FBRSQ9HAH7 460 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 HMGXB4Q9UGU5 601 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 NUDT5Q9UKK9 219 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 BTBD3Q9Y2F9 522 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.53□□□□□ -0.08
VPS29-201ENST00000360579 SNX11Q9Y5W9 270 aa14.53□□□□□ -0.08
VPS29-201ENST00000360579 VNN1O95497 513 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 KLKB1P03952 638 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 CDK4P11802 303 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 PRKCHP24723 683 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 CORO1AP31146 461 aaKnown RBP14.52□□□□□ -0.09
VPS29-201ENST00000360579 NASPP49321 788 aaPredicted RBP14.52□□□□□ -0.09
VPS29-201ENST00000360579 ZBTB16Q05516 673 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 EHHADHQ08426 723 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 STK38Q15208 465 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 ZACNQ401N2 412 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 CACUL1Q86Y37 369 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 CPXM2Q8N436 756 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 ADAM32Q8TC27 787 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 DDI1Q8WTU0 396 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 DHX58Q96C10 678 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 NXPE2Q96DL1 559 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 P2RY11Q96G91 374 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 NT5C1AQ9BXI3 368 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 ZSCAN16Q9H4T2 348 aaPredicted RBP14.52□□□□□ -0.09
VPS29-201ENST00000360579 C6orf106Q9H6K1 298 aaPredicted RBP14.52□□□□□ -0.09
VPS29-201ENST00000360579 TM9SF3Q9HD45 589 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms