RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CDC42BPBQ9Y5S2 1711 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 TSPAN4O14817 238 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 MYL12BO14950 172 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 BGNP21810 368 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 ATP2C1P98194 919 aaPredicted RBP13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 SLC44A2Q8IWA5 706 aaPredicted RBP13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 RNF146Q9NTX7 359 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 ANAPC2Q9UJX6 822 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 METP08581 1390 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 ATMINO43313 823 aaPredicted RBP13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 KRT36O76013 467 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 HLA-DQA1Q5Y7H0 255 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 RBM44Q6ZP01 1051 aaKnown RBP13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 TPCN2Q8NHX9 752 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 PYDC1Q8WXC3 89 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 KCTD10Q9H3F6 313 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 RIBC2Q9H4K1 309 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 STOML2Q9UJZ1 356 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 ARAP3Q8WWN8 1544 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 C19orf81C9J6K1 198 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 TEX46H3BTG2 121 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 TGM2P21980 687 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 RUNDC3AQ59EK9 446 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 FOXR1Q6PIV2 292 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 MARK2Q7KZI7 788 aaKnown RBP13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 COMMD2Q86X83 199 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 HERC6Q8IVU3 1022 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 ZNF669Q96BR6 464 aaPredicted RBP13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 BCL2L14Q9BZR8 327 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 CLPBQ9H078 707 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 RSL24D1Q9UHA3 163 aaKnown RBP13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 SIK3Q9Y2K2 1263 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 ALG6Q9Y672 507 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 NEDD4P46934 1319 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 KIF20BQ96Q89 1820 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 AGKQ53H12 422 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 UBE2Q1Q7Z7E8 422 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 MZF1P28698 734 aaPredicted RBP13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 CCNG1P51959 295 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 SAPCD2Q86UD0 394 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 DHFR2Q86XF0 187 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 SEMA6AQ9H2E6 1030 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 PADI4Q9UM07 663 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 CD3EAPO15446 510 aaKnown RBP13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 TSPAN19P0C672 248 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 BNC1Q01954 994 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 CASP12Q6UXS9 341 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 LRRC17Q8N6Y2 441 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 CENPIQ92674 756 aaPredicted RBP13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 RNPEPL1Q9HAU8 725 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 CDC16Q13042 620 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 RNF180Q86T96 592 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 FAM228AQ86W67 206 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 CAMKK1Q8N5S9 505 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 ZSCAN18Q8TBC5 510 aaPredicted RBP13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 PRKD2Q9BZL6 878 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 CNOT7Q9UIV1 285 aaKnown RBP13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 ATP5BP06576 529 aaKnown RBP13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 IL12AP29459 219 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 CRKP46108 304 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 FMO5P49326 533 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 PDIA5Q14554 519 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 PYDC2Q56P42 97 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 RIPOR1Q6ZS17 1223 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 ITIH5Q86UX2 942 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 CD302Q8IX05 232 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 FIG4Q92562 907 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 PRMT7Q9NVM4 692 aaPredicted RBP13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 SRP68Q9UHB9 627 aaKnown RBP13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 SNX8Q9Y5X2 465 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 MYBL2P10244 700 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 HOXB6P17509 224 aaKnown RBP13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 ZNF177Q13360 481 aaPredicted RBP13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 SNAPC2Q13487 334 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 GALNT18Q6P9A2 607 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 DHRSXQ8N5I4 330 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 CAVIN3Q969G5 261 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 MAGEB10Q96LZ2 347 aaPredicted RBP13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 C17orf75Q9HAS0 396 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 CASZ1Q86V15 1759 aa13.53□□□□□ -0.24
SRGAP3-201ENST00000360413 KATNA1O75449 491 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 LDLRP01130 860 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 CHRM3P20309 590 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 PTDSS1P48651 473 aaKnown RBP13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 ERICH5Q6P6B1 374 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 IPMKQ8NFU5 416 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 TMEM169Q96HH4 297 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 GANQ9H2C0 597 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 EPB41L1Q9H4G0 881 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 AGRPO00253 132 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 VPS4BO75351 444 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 F9P00740 461 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 ENO2P09104 434 aaPredicted RBP13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 ITGB6P18564 788 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 MYO1HQ8N1T3 1032 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 LY9Q9HBG7 655 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 BARHL2Q9NY43 387 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 PSMG1O95456 288 aa13.52□□□□□ -0.24
SRGAP3-201ENST00000360413 DGKDQ16760 1214 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms