RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 CRYMQ14894 314 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 PTGES3Q15185 160 aaKnown RBP9.93□□□□□ -0.82
CUX1-203ENST00000360264 ZNF618Q5T7W0 954 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 KLHL24Q6TFL4 600 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 CASP12Q6UXS9 341 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 GMCL1P1Q8NEA9 526 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 USP42Q9H9J4 1324 aaKnown RBP9.93□□□□□ -0.82
CUX1-203ENST00000360264 XPO1O14980 1071 aaKnown RBP9.93□□□□□ -0.82
CUX1-203ENST00000360264 ZBTB39O15060 712 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 CD3EAPO15446 510 aaKnown RBP9.93□□□□□ -0.82
CUX1-203ENST00000360264 CCNA2P20248 432 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 SSTR3P32745 418 aaPredicted RBP9.93□□□□□ -0.82
CUX1-203ENST00000360264 MGAT5Q09328 741 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 TIMM50Q3ZCQ8 353 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 MDH1BQ5I0G3 518 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 ATL1Q8WXF7 558 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 GLI2P10070 1586 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 TRIM49D1C9J1S8 452 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 SLC9A3R1O14745 358 aaPredicted RBP9.93□□□□□ -0.82
CUX1-203ENST00000360264 MSCO60682 206 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 HALP42357 657 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 CDK7P50613 346 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 C4orf33Q8N1A6 199 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 GALNT4Q8N4A0 578 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 MAGED4Q96JG8 741 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 DEFB129Q9H1M3 183 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 SHOC2Q9UQ13 582 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 LOC100653049A0A140TA62 436 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 PNMA8CA0A1B0GUJ8 204 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 DYTNA2CJ06 578 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 PRR23AA6NEV1 266 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 HPCAL1P37235 193 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 RPL3P39023 403 aaKnown RBP9.92□□□□□ -0.82
CUX1-203ENST00000360264 SERPINH1P50454 418 aaKnown RBP9.92□□□□□ -0.82
CUX1-203ENST00000360264 MYL6P60660 151 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 NFYCQ13952 458 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 FUT11Q495W5 492 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 GPAMQ9HCL2 828 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 TAF4O00268 1085 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 KLHL41O60662 606 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 FGFR2P21802 821 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 GRK2P25098 689 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 AGMOQ6ZNB7 445 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 MYMKA6NI61 221 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 CRABP2P29373 138 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 C11orf74Q86VG3 221 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 OR52L1Q8NGH7 329 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 ZDHHC15Q96MV8 337 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 PNKPQ96T60 521 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 COPG2Q9UBF2 871 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 SGTAO43765 313 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 TMEM26Q6ZUK4 368 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.92□□□□□ -0.82
CUX1-203ENST00000360264 S100A13Q99584 98 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 ITGA11Q9UKX5 1188 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 LZTS1Q9Y250 596 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 SPTBN2O15020 2390 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 PP2D1A8MPX8 630 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 MPOP05164 745 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 PGAM1P18669 254 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 GRTP1Q5TC63 336 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 KCNB2Q92953 911 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 C9orf72Q96LT7 481 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 TRIM51Q9BSJ1 452 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 SLC24A2Q9UI40 661 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 BARX2Q9UMQ3 279 aaPredicted RBP9.92□□□□□ -0.82
CUX1-203ENST00000360264 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.92□□□□□ -0.82
CUX1-203ENST00000360264 MEI4A8MW99 385 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 MSH4O15457 936 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 PCDH8O95206 1070 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 ZNF682O95780 498 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 NUDT14O95848 222 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 SERPINF2P08697 491 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 RASA1P20936 1047 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 ALDH9A1P49189 494 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 COPZ1P61923 177 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 ARMC4Q5T2S8 1044 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 FBXO42Q6P3S6 717 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 SLC26A11Q86WA9 606 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 NKX2-3Q8TAU0 364 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 REXO5Q96IC2 774 aaKnown RBP9.92□□□□□ -0.82
CUX1-203ENST00000360264 MTMR12Q9C0I1 747 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 VAV3Q9UKW4 847 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 MYL12BO14950 172 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 CXCR2P25025 360 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 C1orf131Q8NDD1 294 aaKnown RBP9.92□□□□□ -0.82
CUX1-203ENST00000360264 ACTRT1Q8TDG2 376 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 KLHL4Q9C0H6 718 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 MFSD1Q9H3U5 465 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 CAPN10Q9HC96 672 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 ATAD3AQ9NVI7 634 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 WWP2O00308 870 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 MGRN1O60291 552 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 VAV1P15498 845 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 ZNF7P17097 686 aaPredicted RBP9.92□□□□□ -0.82
CUX1-203ENST00000360264 TMEM176AQ96HP8 235 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 TBL1YQ9BQ87 522 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 ATP6V1HQ9UI12 483 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 TNPO3Q9Y5L0 923 aaKnown RBP9.92□□□□□ -0.82
CUX1-203ENST00000360264 SLC12A8A0AV02 714 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms