RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 SDC4P31431 198 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 KIAA0319Q5VV43 1072 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 SLC26A9Q7LBE3 791 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 HOOK3Q86VS8 718 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 CCDC25Q86WR0 208 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 VSIG1Q86XK7 387 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 SCUBE3Q8IX30 993 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 LRRC34Q8IZ02 419 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 TMEM86AQ8N2M4 240 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 FIBCD1Q8N539 461 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 B3GALNT2Q8NCR0 500 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 TEKT4Q8WW24 435 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 PIWIL1Q96J94 861 aaKnown RBP14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 TBCBQ99426 244 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 PRMT1Q99873 361 aaKnown RBP14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 FAM118BQ9BPY3 351 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 RTP3Q9BQQ7 232 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 TMEM109Q9BVC6 243 aa14.39□□□□□ -0.11
CSNK1E-201ENST00000359867 XPO1O14980 1071 aaKnown RBP14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 CST8O60676 142 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 PTPN9P43378 593 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 RPS6KA3P51812 740 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 SLC8A3P57103 927 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 PDK2Q15119 407 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 TRIP13Q15645 432 aaPredicted RBP14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 OVOS1Q6IE37 1185 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 MAP7D3Q8IWC1 876 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 COLGALT1Q8NBJ5 622 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 IGSF21Q96ID5 467 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 ZNF558Q96NG5 402 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 TMEM209Q96SK2 561 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 RAD9AQ99638 391 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 VN1R3Q9BXE9 311 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 UBE2OQ9C0C9 1292 aaKnown RBP14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 ADAM7Q9H2U9 754 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 RGS16O15492 202 aaPredicted RBP14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 ARHGEF15O94989 841 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 SNUPNO95149 360 aaKnown RBP14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 PAX3P23760 479 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 LHX1P48742 406 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 ARSEP51690 589 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 YWHAHQ04917 246 aaPredicted RBP14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 TBC1D25Q3MII6 688 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 CYP4V2Q6ZWL3 525 aaPredicted RBP14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 SLC2A14Q8TDB8 520 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 HSPH1Q92598 858 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 PEBP4Q96S96 227 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 ELAC2Q9BQ52 826 aaKnown RBP14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 DUSP16Q9BY84 665 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 PCDHB8Q9UN66 801 aa14.38□□□□□ -0.11
CSNK1E-201ENST00000359867 SF3B1O75533 1304 aaKnown RBP eCLIP14.38□□□□□ -0.112e-6■■■■■ 43.1
CSNK1E-201ENST00000359867 FOXO6A8MYZ6 492 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 APOC4-APOC2K7ER74 178 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 RIPK2O43353 540 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 GRAP2O75791 330 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 APOC2P02655 101 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 LINC00271P0C7V0 271 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 PTPN1P18031 435 aaKnown RBP14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 C15orf59Q2T9L4 293 aaPredicted RBP14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 FAM133BQ5BKY9 247 aaKnown RBP14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 RTP2Q5QGT7 225 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 IZUMO3Q5VZ72 239 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 HIBCHQ6NVY1 386 aaPredicted RBP14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 METTL23Q86XA0 190 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 RELL1Q8IUW5 271 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 SLC39A11Q8N1S5 342 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 CCDC197Q8NCU1 140 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 SPDYE1Q8NFV5 336 aaPredicted RBP14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 OR10T2Q8NGX3 314 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 PHOSPHO2Q8TCD6 241 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 MGARPQ8TDB4 240 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 TBC1D31Q96DN5 1066 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 CFAP57Q96MR6 1250 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 FAM210AQ96ND0 272 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 AAASQ9NRG9 546 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 GBF1Q92538 1859 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 ZNF487B1APH4 448 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 CSPG5O95196 566 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 CYP11A1P05108 521 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 VIMP08670 466 aaKnown RBP14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 LAG3P18627 525 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 TFDP2Q14188 446 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 LRRC14Q15048 493 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 EFHC1Q5JVL4 640 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 VARS2Q5ST30 1063 aaKnown RBP14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 SH3PXD2AQ5TCZ1 1133 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 RFX6Q8HWS3 928 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 SPATA18Q8TC71 538 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 ACTL9Q8TC94 416 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 ATXN2LQ8WWM7 1075 aaKnown RBP14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 ZNF317Q96PQ6 595 aaPredicted RBP14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 SYT15Q9BQS2 421 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 MAK16Q9BXY0 300 aaKnown RBP14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 CNOT10Q9H9A5 744 aaKnown RBP14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 PCDH9Q9HC56 1237 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 CRTAC1Q9NQ79 661 aa14.37□□□□□ -0.11
CSNK1E-201ENST00000359867 DNALI1O14645 258 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 OR4Q2P0C623 313 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 CDH6P55285 790 aa14.36□□□□□ -0.11
CSNK1E-201ENST00000359867 OTUD4Q01804 1114 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms