RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 DNAJC3Q13217 504 aa19.28■□□□□ 0.68
SNX11-201ENST00000359238 ZFYVE27Q5T4F4 411 aa19.28■□□□□ 0.68
SNX11-201ENST00000359238 OR6B2Q6IFH4 312 aa19.28■□□□□ 0.68
SNX11-201ENST00000359238 MIS12Q9H081 205 aa19.28■□□□□ 0.68
SNX11-201ENST00000359238 TSPYL2Q9H2G4 693 aaPredicted RBP19.28■□□□□ 0.68
SNX11-201ENST00000359238 PAK6Q9NQU5 681 aaPredicted RBP19.28■□□□□ 0.68
SNX11-201ENST00000359238 CHCHD3Q9NX63 227 aaKnown RBP19.28■□□□□ 0.68
SNX11-201ENST00000359238 NINJ2Q9NZG7 142 aa19.28■□□□□ 0.68
SNX11-201ENST00000359238 LMCD1Q9NZU5 365 aa19.28■□□□□ 0.68
SNX11-201ENST00000359238 C3orf70A6NLC5 250 aaPredicted RBP19.27■□□□□ 0.68
SNX11-201ENST00000359238 PAPSS1O43252 624 aaPredicted RBP19.27■□□□□ 0.68
SNX11-201ENST00000359238 EDF1O60869 148 aaKnown RBP19.27■□□□□ 0.68
SNX11-201ENST00000359238 KRT1P04264 644 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 SESN3P58005 492 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 CAV1Q03135 178 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 KRT17Q04695 432 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 DSC3Q14574 896 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 CDO1Q16878 200 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 SLC45A4Q5BKX6 768 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 CYP4V2Q6ZWL3 525 aaPredicted RBP19.27■□□□□ 0.68
SNX11-201ENST00000359238 HACE1Q8IYU2 909 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 ADGRF2Q8IZF7 708 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 NIPA2Q8N8Q9 360 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 GLIS1Q8NBF1 620 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 SLC2A14Q8TDB8 520 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 NRG4Q8WWG1 115 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 SNF8Q96H20 258 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 CFAP57Q96MR6 1250 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 GBP5Q96PP8 586 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 CCDC77Q9BR77 488 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 DCLK3Q9C098 648 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 EURLQ9NYK6 297 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 TBK1Q9UHD2 729 aa19.27■□□□□ 0.68
SNX11-201ENST00000359238 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.27■□□□□ 0.68
SNX11-201ENST00000359238 LRPAP1P30533 357 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 SLC34A1Q06495 639 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 PIGHQ14442 188 aaPredicted RBP19.26■□□□□ 0.67
SNX11-201ENST00000359238 STAT4Q14765 748 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 RCN1Q15293 331 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 PPP1R2P3Q6NXS1 205 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 OLFML1Q6UWY5 402 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 RIBC1Q8N443 379 aaPredicted RBP19.26■□□□□ 0.67
SNX11-201ENST00000359238 APPL2Q8NEU8 664 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 EXD1Q8NHP7 514 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 HASPINQ8TF76 798 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 PAIP2Q9BPZ3 127 aaKnown RBP19.26■□□□□ 0.67
SNX11-201ENST00000359238 MAGEB5Q9BZ81 275 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 PPP1R12CQ9BZL4 782 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 C10orf88Q9H8K7 445 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 UBN1Q9NPG3 1134 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 B4GALT3O60512 393 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 CCL5P13501 91 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 SLC18A1P54219 525 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 KPNB1Q14974 876 aaKnown RBP19.26■□□□□ 0.67
SNX11-201ENST00000359238 GSTA3Q16772 222 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 TAF1BQ53T94 588 aaPredicted RBP19.26■□□□□ 0.67
SNX11-201ENST00000359238 LRRC74BQ6ZQY2 392 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 SYDE1Q6ZW31 735 aaPredicted RBP19.26■□□□□ 0.67
SNX11-201ENST00000359238 RTN4RL1Q86UN2 441 aaPredicted RBP19.26■□□□□ 0.67
SNX11-201ENST00000359238 ZC3H18Q86VM9 953 aaKnown RBP19.26■□□□□ 0.67
SNX11-201ENST00000359238 DENND1AQ8TEH3 1009 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 ZNF560Q96MR9 790 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 TET1Q8NFU7 2136 aa19.26■□□□□ 0.67
SNX11-201ENST00000359238 RASA4BC9J798 803 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 CYB561D2O14569 222 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 RASA4O43374 803 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 CREB3O43889 395 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 THP07101 528 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 IVDP26440 423 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 GSTT1P30711 240 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 ATXN1P54253 815 aaKnown RBP19.25■□□□□ 0.67
SNX11-201ENST00000359238 ADCY1Q08828 1119 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 AP1B1Q10567 949 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 NR1H3Q13133 447 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 SPARCL1Q14515 664 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 ARMC3Q5W041 872 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 RFWD3Q6PCD5 774 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 PAQR9Q6ZVX9 377 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 RXFP2Q8WXD0 754 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 NCSTNQ92542 709 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 MIPEPQ99797 713 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 TMEM30AQ9NV96 361 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 ASIC3Q9UHC3 531 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 ZFP69BQ9UJL9 534 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 INPP5FQ9Y2H2 1132 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 SLC4A7Q9Y6M7 1214 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 A0A0U1RQF3 1178 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 C2CD4BA6NLJ0 364 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 MIPP30301 263 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 ATN1P54259 1190 aaPredicted RBP19.25■□□□□ 0.67
SNX11-201ENST00000359238 PDK4Q16654 411 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 SPOCD1Q6ZMY3 1216 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 CTU1Q7Z7A3 348 aaKnown RBP19.25■□□□□ 0.67
SNX11-201ENST00000359238 CRYBG2Q8N1P7 616 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 PPFIBP2Q8ND30 876 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 MAML1Q92585 1016 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 CCDC28BQ9BUN5 200 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 SLC4A5Q9BY07 1137 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 CADM1Q9BY67 442 aaKnown RBP19.25■□□□□ 0.67
SNX11-201ENST00000359238 UBE2OQ9C0C9 1292 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms