RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 OTUD4Q01804 1114 aaKnown RBP13.33□□□□□ -0.28
NLRC3-202ENST00000359128 C2CD6Q53TS8 623 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 AGBL2Q5U5Z8 902 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 FBXO36Q8NEA4 188 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 UBP1Q9NZI7 540 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 VANGL2Q9ULK5 521 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 MRPS23Q9Y3D9 190 aaKnown RBP13.33□□□□□ -0.28
NLRC3-202ENST00000359128 LMTK2Q8IWU2 1503 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 RBP1P09455 135 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 CCDC130P13994 396 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 KYNUQ16719 465 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 TMEM86AQ8N2M4 240 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 MAGEC3Q8TD91 643 aa13.33□□□□□ -0.28
NLRC3-202ENST00000359128 PPP1R10Q96QC0 940 aaKnown RBP13.33□□□□□ -0.28
NLRC3-202ENST00000359128 WLSQ5T9L3 541 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 SLC13A5Q86YT5 568 aaPredicted RBP13.32□□□□□ -0.28
NLRC3-202ENST00000359128 FTHL17Q9BXU8 183 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 RAD51BO15315 384 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 ZNF7P17097 686 aaPredicted RBP13.32□□□□□ -0.28
NLRC3-202ENST00000359128 BDNFP23560 247 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 NME5P56597 212 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 SHROOM1Q2M3G4 852 aaPredicted RBP13.32□□□□□ -0.28
NLRC3-202ENST00000359128 PRAMEF19Q5SWL8 479 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 PARP9Q8IXQ6 854 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 ERP44Q9BS26 406 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 ACTR8Q9H981 624 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 PCDHB9Q9Y5E1 797 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 SLC15A5A6NIM6 579 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 PPP1R3GB7ZBB8 358 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 MDH1P40925 334 aaKnown RBP13.32□□□□□ -0.28
NLRC3-202ENST00000359128 SPOCD1Q6ZMY3 1216 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 ZNF720Q7Z2F6 126 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 SLC47A2Q86VL8 602 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 COMMD2Q86X83 199 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 GALNT4Q8N4A0 578 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 TINF2Q9BSI4 451 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 UBA2Q9UBT2 640 aaPredicted RBP13.32□□□□□ -0.28
NLRC3-202ENST00000359128 GPN3Q9UHW5 284 aaPredicted RBP13.32□□□□□ -0.28
NLRC3-202ENST00000359128 SALL1Q9NSC2 1324 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 A0A0A6YYK5 440 aaPredicted RBP13.32□□□□□ -0.28
NLRC3-202ENST00000359128 PSMA4P25789 261 aaKnown RBP13.32□□□□□ -0.28
NLRC3-202ENST00000359128 LRRC23Q53EV4 343 aaPredicted RBP13.32□□□□□ -0.28
NLRC3-202ENST00000359128 FOXR1Q6PIV2 292 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 USP38Q8NB14 1042 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 NKX2-3Q8TAU0 364 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 DEPDC7Q96QD5 511 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 AASDHPPTQ9NRN7 309 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 KLHL28Q9NXS3 571 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 GPSM3Q9Y4H4 160 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 DEAF1O75398 565 aaPredicted RBP13.32□□□□□ -0.28
NLRC3-202ENST00000359128 FXR1P51114 621 aaKnown RBP eCLIP13.32□□□□□ -0.28
NLRC3-202ENST00000359128 PMS1P54277 932 aaKnown RBP13.32□□□□□ -0.28
NLRC3-202ENST00000359128 CSHL1Q14406 222 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 POMGNT2Q8NAT1 580 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 OSBPL1AQ9BXW6 950 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 CCDC134Q9H6E4 229 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 KLHL20Q9Y2M5 609 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 USP15Q9Y4E8 981 aaPredicted RBP13.32□□□□□ -0.28
NLRC3-202ENST00000359128 NRCAMQ92823 1304 aa13.32□□□□□ -0.28
NLRC3-202ENST00000359128 NCOA3Q9Y6Q9 1424 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 A8MX80 341 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 C1QTNF3-AMACRE9PGA6 284 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 CNPP09543 421 aaKnown RBP13.31□□□□□ -0.28
NLRC3-202ENST00000359128 SHMT1P34896 483 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 MLH1P40692 756 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 STX5Q13190 355 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 INSCQ1MX18 579 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 ARMC12Q5T9G4 340 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 SLC22A9Q8IVM8 553 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 BBS4Q96RK4 519 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 APBA2Q99767 749 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 SAE1Q9UBE0 346 aaPredicted RBP13.31□□□□□ -0.28
NLRC3-202ENST00000359128 CCDC189A1A4V9 331 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 PYGMP11217 842 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 CYLC2Q14093 348 aaPredicted RBP13.31□□□□□ -0.28
NLRC3-202ENST00000359128 NIPA1Q7RTP0 329 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 RIOX2Q8IUF8 465 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 HOMEZQ8IX15 550 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 DTX3LQ8TDB6 740 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 PHACTR1Q9C0D0 580 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 GANQ9H2C0 597 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 E9PBE3 544 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 ABCB1P08183 1280 aaPredicted RBP13.31□□□□□ -0.28
NLRC3-202ENST00000359128 SMIM10L2AP0DMW4 78 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 SMIM10L2BP0DMW5 78 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 NUDT2P50583 147 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 LRRC36Q1X8D7 754 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 WDR24Q96S15 920 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 TBL1YQ9BQ87 522 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 ABCC13Q9NSE7 274 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 ADAM21Q9UKJ8 722 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 SF3B1O75533 1304 aaKnown RBP eCLIP13.31□□□□□ -0.28
NLRC3-202ENST00000359128 TMEM88BA6NKF7 163 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 DAB1O75553 588 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 USP1O94782 785 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 USP17L7P0C7H9 530 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 CXCL17Q6UXB2 119 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 USP49Q70CQ1 688 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 PRRG3Q9BZD7 231 aa13.31□□□□□ -0.28
NLRC3-202ENST00000359128 EPC1Q9H2F5 836 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms