RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 TSHZ1Q6ZSZ6 1077 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 C1orf186Q6ZWK4 172 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 HSPH1Q92598 858 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 UNC93B1Q9H1C4 597 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 SF3B1O75533 1304 aaKnown RBP eCLIP4.23□□□□□ -1.73
SYNE2-204ENST00000358025 CFAP99D6REC4 459 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 PEX14O75381 377 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 SCNN1AP37088 669 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 SLC26A2P50443 739 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 MPP3Q13368 585 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 PLEKHA7Q6IQ23 1121 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 ARID3BQ8IVW6 561 aaPredicted RBP4.23□□□□□ -1.73
SYNE2-204ENST00000358025 SLC4A11Q8NBS3 891 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 PACSIN1Q9BY11 444 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 INPP5FQ9Y2H2 1132 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 F9P00740 461 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 ALAS1P13196 640 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 YWHABP31946 246 aaKnown RBP4.23□□□□□ -1.73
SYNE2-204ENST00000358025 SLC26A3P40879 764 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 C1DQ13901 141 aaKnown RBP4.23□□□□□ -1.73
SYNE2-204ENST00000358025 ARMC4Q5T2S8 1044 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 IER5Q5VY09 327 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 LRP10Q7Z4F1 713 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 HEMGNQ9BXL5 484 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 FANCEQ9HB96 536 aa4.23□□□□□ -1.73
SYNE2-204ENST00000358025 FAM32AQ9Y421 112 aaKnown RBP4.23□□□□□ -1.73
SYNE2-204ENST00000358025 TRIM24O15164 1050 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 RAG1P15918 1043 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 KRT20P35900 424 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 MAMLD1Q13495 774 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 GK3PQ14409 553 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ACTL9Q8TC94 416 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 CACNA2D2Q9NY47 1150 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ENTPD3O75355 529 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 GCATO75600 419 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 CFBP00751 764 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 THOC7Q6I9Y2 204 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 DSELQ8IZU8 1212 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 MFHAS1Q9Y4C4 1052 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 GNGT2O14610 69 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 TNK2Q07912 1038 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 FOXM1Q08050 763 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 DLG1Q12959 904 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 LAMC2Q13753 1193 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 TBX20Q9UMR3 447 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 PCDHB12Q9Y5F1 795 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 PAPSS1O43252 624 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ZCCHC18P0CG32 403 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 BTDP43251 543 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 RBP5P82980 135 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 GRAPQ13588 217 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SKIV2LQ15477 1246 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ILDR2Q71H61 639 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 GRAPLQ8TC17 118 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SLC35C1Q96A29 364 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 MXRA8Q9BRK3 442 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF670Q9BS34 389 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 MMTAG2Q9BU76 263 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 TRIM54Q9BYV2 358 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 NECTIN3Q9NQS3 549 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 LRRIQ4A6NIV6 560 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 MTMR1Q13613 665 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 PEX13Q92968 403 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 NSMCE2Q96MF7 247 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF570Q96NI8 536 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 CFLARO15519 480 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 BPGMP07738 259 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 HSD17B4P51659 736 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 GABPAQ06546 454 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SQLEQ14534 574 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 OR52E8Q6IFG1 317 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 LRRC8DQ7L1W4 858 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 NKX2-3Q8TAU0 364 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 MBOAT7Q96N66 472 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 PCDHGC3Q9UN70 934 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 TRIM49D1C9J1S8 452 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 TMC5Q6UXY8 1006 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 WDR49Q8IV35 697 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 BANPQ8N9N5 519 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 LSM14AQ8ND56 463 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 DACH2Q96NX9 599 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SPATA31A3Q5VYP0 1347 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 PDZK1P1A8MUH7 402 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 NCK2O43639 380 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 CES1P23141 567 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ACSBG2Q5FVE4 666 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 OTOAQ7RTW8 1153 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 STRA8Q7Z7C7 330 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 TCF12Q99081 682 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 HNRNPABQ99729 332 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SYT15Q9BQS2 421 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 CELF4Q9BZC1 486 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 NIF3L1Q9GZT8 377 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 HSPBP1Q9NZL4 362 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SIRPGQ9P1W8 387 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 STAP1Q9ULZ2 295 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 CHKBQ9Y259 395 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 C1orf232A0A0U1RR37 186 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 RPS6KA4O75676 772 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SNHG28P0DPA3 235 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms