RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 THEMIS2Q5TEJ8 643 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 FYB2Q5VWT5 728 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 TRIM72Q6ZMU5 477 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 PHF13Q86YI8 300 aaPredicted RBP13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 RCOR2Q8IZ40 523 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 GALNT15Q8N3T1 639 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 TSC22D3Q99576 134 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 LPIN3Q9BQK8 851 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 BCO2Q9BYV7 579 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 VPS11Q9H270 941 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 SLC38A7Q9NVC3 462 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 DNAJB4Q9UDY4 337 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 GSC2O15499 205 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 B3GAT3O94766 335 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 TGDSO95455 350 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 ITGB1P05556 798 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 PDGFRBP09619 1106 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 TROVE2P10155 538 aaKnown RBP eCLIP13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 P4HA1P13674 534 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 CD19P15391 556 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 PBX3P40426 434 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 GPX6P59796 221 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 FAM189BP81408 668 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 OASLQ15646 514 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 SOWAHAQ2M3V2 549 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 LIN9Q5TKA1 542 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 AP1ARQ63HQ0 302 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 LLGL2Q6P1M3 1020 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 TMEM154Q6P9G4 183 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 RFWD3Q6PCD5 774 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 ADGRD1Q6QNK2 874 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 OTOP2Q7RTS6 562 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 MTDHQ86UE4 582 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 C7orf61Q8IZ16 206 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 TEKT4Q8WW24 435 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 APBB2Q92870 758 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 NKD2Q969F2 451 aaPredicted RBP13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 FAM118BQ9BPY3 351 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 MRPL47Q9HD33 250 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 TMEM161AQ9NX61 479 aa13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.14□□□□□ -0.31
RTFDC1-202ENST00000357348 TM9SF1O15321 606 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 CYP3A5P20815 502 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 BRCC3P46736 316 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 NDST1P52848 882 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 MXRA7P84157 204 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 IKBKEQ14164 716 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 KRT72Q14CN4 511 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 RBBP5Q15291 538 aaKnown RBP13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 UPP1Q16831 310 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 NOMO2Q5JPE7 1267 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 LRRC38Q5VT99 294 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 PPP1R2P3Q6NXS1 205 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 DSTYKQ6XUX3 929 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 GSTA5Q7RTV2 222 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 LRRC52Q8N7C0 313 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 UBR7Q8N806 425 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 OR6B3Q8NGW1 331 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 NRG4Q8WWG1 115 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 SKA1Q96BD8 255 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 ALKBH8Q96BT7 664 aaKnown RBP13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 RBM41Q96IZ5 413 aaKnown RBP13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 ZNF560Q96MR9 790 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 ELOVL4Q9GZR5 314 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 PAPOLBQ9NRJ5 636 aaKnown RBP13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 TBC1D13Q9NVG8 400 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 RABGEF1Q9UJ41 708 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 DNPEPQ9ULA0 475 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 PRG3Q9Y2Y8 225 aaPredicted RBP13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 NME7Q9Y5B8 376 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 CEP290O15078 2479 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 H0Y3Z8 333 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 MAP3K13O43283 966 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 GSTA2P09210 222 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 LMO2P25791 158 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 LRPAP1P30533 357 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 CETN2P41208 172 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 OR1G1P47890 313 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 ARSEP51690 589 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 GEMIN4P57678 1058 aaKnown RBP13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 NOMO3P69849 1222 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 SLC34A1Q06495 639 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 MUM1Q2TAK8 710 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 SNX30Q5VWJ9 437 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 DAB2IPQ5VWQ8 1189 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 CENPUQ71F23 418 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 UBE2Q1Q7Z7E8 422 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 C12orf29Q8N999 325 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 TFAP2BQ92481 460 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 NSL1Q96IY1 281 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 SLITRK1Q96PX8 696 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 TRAPPC9Q96Q05 1148 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 VCXQ9H320 206 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 VRTNQ9H8Y1 702 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 NPHS2Q9NP85 383 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 ARL8BQ9NVJ2 186 aa13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
RTFDC1-202ENST00000357348 SCINQ9Y6U3 715 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms