RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.94□□□□□ -0.82
RPE-201ENST00000354506 SCOCQ9UIL1 159 aa9.94□□□□□ -0.82
RPE-201ENST00000354506 FAM159BA6NKW6 160 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 FZD9O00144 591 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 STAU1O95793 577 aaKnown RBP9.93□□□□□ -0.82
RPE-201ENST00000354506 CDH6P55285 790 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 RPL10AP62906 217 aaKnown RBP9.93□□□□□ -0.82
RPE-201ENST00000354506 POU5F1BQ06416 359 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 SLC34A1Q06495 639 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 OLIG2Q13516 323 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 JADE1Q6IE81 842 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 MPP5Q8N3R9 675 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 PCDH19Q8TAB3 1148 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 RXFP2Q8WXD0 754 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 LRRC39Q96DD0 335 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 PGBD4Q96DM1 585 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 LPIN3Q9BQK8 851 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 ADPGKQ9BRR6 497 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 NGRNQ9NPE2 291 aaKnown RBP9.93□□□□□ -0.82
RPE-201ENST00000354506 ETNK2Q9NVF9 386 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 CCDC160A6NGH7 325 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 A8MXQ7 604 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 F8W8V4 182 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 KCNN4O15554 427 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 MAP3K7O43318 606 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 GABBR2O75899 941 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 SNRPAP09012 282 aaKnown RBP9.93□□□□□ -0.82
RPE-201ENST00000354506 C6orf222P0C671 652 aaPredicted RBP9.93□□□□□ -0.82
RPE-201ENST00000354506 RBL1P28749 1068 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 ATXN1P54253 815 aaKnown RBP9.93□□□□□ -0.82
RPE-201ENST00000354506 TFDP2Q14188 446 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 CELF3Q5SZQ8 465 aaKnown RBP9.93□□□□□ -0.82
RPE-201ENST00000354506 TREML2Q5T2D2 321 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 FAM183BPQ6ZVS7 135 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 PPFIBP2Q8ND30 876 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 IFT43Q96FT9 208 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 GBP5Q96PP8 586 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 PHF12Q96QT6 1004 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 R3HDMLQ9H3Y0 253 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 MOCS1Q9NZB8 636 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 GINS2Q9Y248 185 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 ASB3Q9Y575 518 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 OR6B1O95007 311 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 PGM3O95394 542 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 APOEP02649 317 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 SPATA31D3P0C874 917 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 SAT1P21673 171 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 CRHR1P34998 444 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 MRPS35P82673 323 aaKnown RBP9.93□□□□□ -0.82
RPE-201ENST00000354506 BTKQ06187 659 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 AP1B1Q10567 949 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 STXBP5Q5T5C0 1151 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 FAM102AQ5T9C2 384 aaPredicted RBP9.93□□□□□ -0.82
RPE-201ENST00000354506 PAOXQ6QHF9 649 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 OLFML1Q6UWY5 402 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 UNC5AQ6ZN44 842 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 SPATA31D4Q6ZUB0 917 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 RAPH1Q70E73 1250 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 IFNLR1Q8IU57 520 aaPredicted RBP9.93□□□□□ -0.82
RPE-201ENST00000354506 ADAM32Q8TC27 787 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 DNAJC1Q96KC8 554 aaKnown RBP9.93□□□□□ -0.82
RPE-201ENST00000354506 NLRP4Q96MN2 994 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 C1orf21Q9H246 121 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 RPF1Q9H9Y2 349 aaKnown RBP9.93□□□□□ -0.82
RPE-201ENST00000354506 ZNF358Q9NW07 568 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 DDX43Q9NXZ2 648 aaKnown RBP9.93□□□□□ -0.82
RPE-201ENST00000354506 PIM2Q9P1W9 311 aa9.93□□□□□ -0.82
RPE-201ENST00000354506 GCATO75600 419 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 DGKIO75912 1065 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 ITGB3P05106 788 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 ATP5BP06576 529 aaKnown RBP9.92□□□□□ -0.82
RPE-201ENST00000354506 CSH1P0DML2 217 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 CSH2P0DML3 217 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 NCF2P19878 526 aaPredicted RBP9.92□□□□□ -0.82
RPE-201ENST00000354506 IGBP1P78318 339 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 EN1Q05925 392 aaPredicted RBP9.92□□□□□ -0.82
RPE-201ENST00000354506 TUBB3Q13509 450 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 SLC10A6Q3KNW5 377 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 BOLA3Q53S33 107 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 TMPRSS6Q8IU80 811 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 APLFQ8IW19 511 aaPredicted RBP9.92□□□□□ -0.82
RPE-201ENST00000354506 ADGRF2Q8IZF7 708 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 NDUFAF2Q8N183 169 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 LINC01465Q8N7H1 131 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.92□□□□□ -0.82
RPE-201ENST00000354506 MTBPQ96DY7 904 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 PANX3Q96QZ0 392 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 PCDH18Q9HCL0 1135 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 BARX2Q9UMQ3 279 aaPredicted RBP9.92□□□□□ -0.82
RPE-201ENST00000354506 M0QYV0 167 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 MDM4O15151 490 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 BIRC5O15392 142 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 ITM2AO43736 263 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 ALDH1A2O94788 518 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 NPTXRO95502 500 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 STAG3L1P0CL83 205 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 SKIP12755 728 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 PDGFRAP16234 1089 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 NUMBP49757 651 aa9.92□□□□□ -0.82
RPE-201ENST00000354506 SLC10A2Q12908 348 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms