RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 A0A1W2PQH9 124 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.09□□□□□ -0.47
CDRT1-202ENST00000354433 RIOK3O14730 519 aaKnown RBP12.09□□□□□ -0.47
CDRT1-202ENST00000354433 AXIN1O15169 862 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 APBB3O95704 486 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 TBX18O95935 607 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 RETP07949 1114 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 PLEKP08567 350 aaPredicted RBP12.09□□□□□ -0.47
CDRT1-202ENST00000354433 HOXA6P31267 233 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 ATP5C1P36542 298 aaKnown RBP12.09□□□□□ -0.47
CDRT1-202ENST00000354433 LMNB2Q03252 620 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 GAD2Q05329 585 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 KLHL30Q0D2K2 578 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 KIF5AQ12840 1032 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 TUBB2AQ13885 445 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 TDRD12Q587J7 1177 aaKnown RBP12.09□□□□□ -0.47
CDRT1-202ENST00000354433 C10orf120Q5SQS8 335 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 SMYD5Q6GMV2 418 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 RHBDF2Q6PJF5 856 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 C12orf40Q86WS4 652 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 NAT16Q8N8M0 369 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 OTUB2Q96DC9 234 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 TMEM176AQ96HP8 235 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 FAM81BQ96LP2 452 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 PNKPQ96T60 521 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 TUBB2BQ9BVA1 445 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 DUSP16Q9BY84 665 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 ARHGEF4Q9NR80 690 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 DNAJC12Q9UKB3 198 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 NUDT5Q9UKK9 219 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 CDV3Q9UKY7 258 aaKnown RBP12.09□□□□□ -0.47
CDRT1-202ENST00000354433 PCDHA13Q9Y5I0 950 aa12.09□□□□□ -0.47
CDRT1-202ENST00000354433 CCDC163A0A0D9SF12 145 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 MDM4O15151 490 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 RALAP11233 206 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 RARGP13631 454 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 CD19P15391 556 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 SOX5P35711 763 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 EIF2DP41214 584 aaKnown RBP12.08□□□□□ -0.48
CDRT1-202ENST00000354433 SLC6A11P48066 632 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 PGFP49763 221 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 DGKEP52429 567 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 YWHAEP62258 255 aaKnown RBP12.08□□□□□ -0.48
CDRT1-202ENST00000354433 APBA1Q02410 837 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 CUL2Q13617 745 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 SLC18A3Q16572 532 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 RSPO4Q2I0M5 234 aaPredicted RBP12.08□□□□□ -0.48
CDRT1-202ENST00000354433 DGLUCYQ7Z3D6 616 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 TADA2BQ86TJ2 420 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 VPS36Q86VN1 386 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 CCDC33Q8N5R6 958 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 FAM160A2Q8N612 972 aaPredicted RBP12.08□□□□□ -0.48
CDRT1-202ENST00000354433 SLC4A11Q8NBS3 891 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 GAB3Q8WWW8 586 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 TATDN2Q93075 761 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 FAXDC2Q96IV6 333 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 CYLDQ9NQC7 956 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 RASAL2Q9UJF2 1139 aa12.08□□□□□ -0.48
CDRT1-202ENST00000354433 UQCRHLA0A096LP55 91 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 HHLA1C9JL84 531 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 F8VZ95 297 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 KAT7O95251 611 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 UQCRHP07919 91 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 GBP1P32455 592 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 TIE1P35590 1138 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 MAGEA1P43355 309 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 PSEN1P49768 467 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 RAD23BP54727 409 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 PUM1Q14671 1186 aaKnown RBP eCLIP12.07□□□□□ -0.48
CDRT1-202ENST00000354433 GOLGA7BQ2TAP0 167 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 GAB4Q2WGN9 574 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 CCDC122Q5T0U0 273 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 ANO7Q6IWH7 933 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 TPGS1Q6ZTW0 290 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 RSRC2Q7L4I2 434 aaKnown RBP12.07□□□□□ -0.48
CDRT1-202ENST00000354433 ERMP1Q7Z2K6 904 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 MIB1Q86YT6 1006 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 USP33Q8TEY7 942 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 WDR24Q96S15 920 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 TPSD1Q9BZJ3 242 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 NMUR1Q9HB89 426 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 PARD6AQ9NPB6 346 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 SPHK2Q9NRA0 654 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.07□□□□□ -0.48
CDRT1-202ENST00000354433 OSER1Q9NX31 292 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 HESX1Q9UBX0 185 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 DNMT3LQ9UJW3 386 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 TSPAN16Q9UKR8 245 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.07□□□□□ -0.48
CDRT1-202ENST00000354433 MYO16Q9Y6X6 1858 aa12.07□□□□□ -0.48
CDRT1-202ENST00000354433 TBC1D3BA6NDS4 549 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 NEDD8-MDP1E9PL57 170 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 K7EQS6 105 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 DYNC1I1O14576 645 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 TBXAS1P24557 533 aaPredicted RBP12.06□□□□□ -0.48
CDRT1-202ENST00000354433 GRIA2P42262 883 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 DRAP1Q14919 205 aaPredicted RBP12.06□□□□□ -0.48
CDRT1-202ENST00000354433 PREPLQ4J6C6 727 aaPredicted RBP12.06□□□□□ -0.48
CDRT1-202ENST00000354433 SGO2Q562F6 1265 aa12.06□□□□□ -0.48
CDRT1-202ENST00000354433 ZNF569Q5MCW4 686 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms