RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 POU5F2Q8N7G0 328 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 TRAPPC9Q96Q05 1148 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 EFCAB1Q9HAE3 211 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 LAMA4Q16363 1823 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 ASTN2O75129 1339 aaPredicted RBP15.17■□□□□ 0.02
NUP50-201ENST00000347635 CARNS1A5YM72 827 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 CLPTM1O96005 669 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 OCA2Q04671 838 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 MON1BQ7L1V2 547 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 CCDC60Q8IWA6 550 aaPredicted RBP15.17■□□□□ 0.02
NUP50-201ENST00000347635 ATPAF2Q8N5M1 289 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 COLGALT1Q8NBJ5 622 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 LRRC39Q96DD0 335 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 ZBTB18Q99592 522 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 HMX1Q9NP08 348 aaPredicted RBP15.17■□□□□ 0.02
NUP50-201ENST00000347635 ARHGEF3Q9NR81 526 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 FZD9O00144 591 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 PIAS1O75925 651 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 ODC1P11926 461 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 RAG1P15918 1043 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 CREB1P16220 341 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 MAP2K5Q13163 448 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 MFSD10Q14728 455 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 TMEM259Q4ZIN3 620 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 TCHHL1Q5QJ38 904 aaPredicted RBP15.17■□□□□ 0.02
NUP50-201ENST00000347635 CELF3Q5SZQ8 465 aaKnown RBP15.17■□□□□ 0.02
NUP50-201ENST00000347635 DENND1BQ6P3S1 775 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 RFWD2Q8NHY2 731 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 ASAP3Q8TDY4 903 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 A0A0B4J269 797 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 XPO1O14980 1071 aaKnown RBP15.17■□□□□ 0.02
NUP50-201ENST00000347635 SLC1A5Q15758 541 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 CCDC153Q494R4 210 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 VSTM1Q6UX27 236 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 PCYOX1LQ8NBM8 494 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 ZSWIM2Q8NEG5 633 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 ETNK2Q9NVF9 386 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 SLC17A7Q9P2U7 560 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 DSEQ9UL01 958 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 TRPM3Q9HCF6 1732 aaPredicted RBP15.16■□□□□ 0.02
NUP50-201ENST00000347635 RBL1P28749 1068 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 GRIK1P39086 918 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 SPIRE1Q08AE8 756 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 NOL9Q5SY16 702 aaKnown RBP15.16■□□□□ 0.02
NUP50-201ENST00000347635 EMC10Q5UCC4 262 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 NPNTQ6UXI9 565 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 BBS12Q6ZW61 710 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 CLNKQ7Z7G1 428 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 NMD3Q96D46 503 aaKnown RBP15.16■□□□□ 0.02
NUP50-201ENST00000347635 XPNPEP3Q9NQH7 507 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 TSPAN16Q9UKR8 245 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 TOMM70O94826 608 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 PGAM1P18669 254 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 ADRM1Q16186 407 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 PLEKHA7Q6IQ23 1121 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.16■□□□□ 0.02
NUP50-201ENST00000347635 SPOCK2Q92563 424 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 TMEM134Q9H6X4 195 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 PIDD1Q9HB75 910 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 NMRK1Q9NWW6 199 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 SORCS3Q9UPU3 1222 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 H7C4K7 107 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 PSEN2P49810 448 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 HDAC4P56524 1084 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 STX5Q13190 355 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 TMEM132BQ14DG7 1078 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 THAP11Q96EK4 314 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 BCAS3Q9H6U6 928 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 BARX2Q9UMQ3 279 aaPredicted RBP15.16■□□□□ 0.02
NUP50-201ENST00000347635 PDE5AO76074 875 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 GSCP56915 257 aaPredicted RBP15.16■□□□□ 0.02
NUP50-201ENST00000347635 RNF219Q5W0B1 726 aaPredicted RBP15.16■□□□□ 0.02
NUP50-201ENST00000347635 LINC00523Q86TU6 105 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 APBA2Q99767 749 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 ARL8BQ9NVJ2 186 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 ATRNL1Q5VV63 1379 aa15.16■□□□□ 0.02
NUP50-201ENST00000347635 TMEM191CA6NGB0 347 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 ABLIM1O14639 778 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 MOCS2O96007 188 aaPredicted RBP15.15■□□□□ 0.02
NUP50-201ENST00000347635 HMGCRP04035 888 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 AVPR1AP37288 418 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 RECQLP46063 649 aaPredicted RBP15.15■□□□□ 0.02
NUP50-201ENST00000347635 ITGA9Q13797 1035 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 SH3TC2Q8TF17 1288 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 ST6GALNAC4Q9H4F1 302 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 SP110Q9HB58 689 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 FBXO6Q9NRD1 293 aaPredicted RBP15.15■□□□□ 0.02
NUP50-201ENST00000347635 KRT82Q9NSB4 513 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 PKD2L2Q9NZM6 624 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 KANSL3Q9P2N6 904 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 SNX5Q9Y5X3 404 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 HSPA1AP0DMV8 641 aaKnown RBP15.15■□□□□ 0.02
NUP50-201ENST00000347635 HSPA1BP0DMV9 641 aaKnown RBP15.15■□□□□ 0.02
NUP50-201ENST00000347635 ANPEPP15144 967 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 CDH8P55286 799 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 FSCN1Q16658 493 aaKnown RBP15.15■□□□□ 0.02
NUP50-201ENST00000347635 PLPPR4Q7Z2D5 763 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 NCLNQ969V3 563 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 TCF7L2Q9NQB0 619 aa15.15■□□□□ 0.02
NUP50-201ENST00000347635 MYH6P13533 1939 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms