RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 PLK2Q9NYY3 685 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 DNAJC12Q9UKB3 198 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 AGO1Q9UL18 857 aaKnown RBP16.81■□□□□ 0.28
RAB5C-201ENST00000346213 KIAA1257Q9ULG3 409 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 LUC7L2Q9Y383 392 aaKnown RBP16.81■□□□□ 0.28
RAB5C-201ENST00000346213 ATG2BQ96BY7 2078 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 OTOGLQ3ZCN5 2332 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 A0A1W2PQJ5 194 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 PAPSS1O43252 624 aaPredicted RBP16.81■□□□□ 0.28
RAB5C-201ENST00000346213 TULP3O75386 442 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 TUBB4AP04350 444 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 DRD1P21728 446 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 KIR2DL1P43626 348 aaPredicted RBP16.81■□□□□ 0.28
RAB5C-201ENST00000346213 SGSHP51688 502 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 TAF5Q15542 800 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 SLC47A2Q86VL8 602 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 PASD1Q8IV76 773 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 OR8K1Q8NGG5 319 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 MIS12Q9H081 205 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 GANQ9H2C0 597 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 LRRC4Q9HBW1 653 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 MARCH2Q9P0N8 246 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 SIK3Q9Y2K2 1263 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 SLC12A8A0AV02 714 aa16.8■□□□□ 0.28
RAB5C-201ENST00000346213 GFRA2O00451 464 aa16.8■□□□□ 0.28
RAB5C-201ENST00000346213 TRIM21P19474 475 aaKnown RBP16.8■□□□□ 0.28
RAB5C-201ENST00000346213 GNA15P30679 374 aa16.8■□□□□ 0.28
RAB5C-201ENST00000346213 CORO1AP31146 461 aaKnown RBP16.8■□□□□ 0.28
RAB5C-201ENST00000346213 LPAL2Q16609 132 aa16.8■□□□□ 0.28
RAB5C-201ENST00000346213 REXO1L1PQ8IX06 675 aa16.8■□□□□ 0.28
RAB5C-201ENST00000346213 SCML4Q8N228 414 aa16.8■□□□□ 0.28
RAB5C-201ENST00000346213 SYNPOQ8N3V7 929 aa16.8■□□□□ 0.28
RAB5C-201ENST00000346213 DNAJC7Q99615 494 aa16.8■□□□□ 0.28
RAB5C-201ENST00000346213 IER2Q9BTL4 223 aa16.8■□□□□ 0.28
RAB5C-201ENST00000346213 SLC4A5Q9BY07 1137 aa16.8■□□□□ 0.28
RAB5C-201ENST00000346213 TBC1D14Q9P2M4 693 aa16.8■□□□□ 0.28
RAB5C-201ENST00000346213 PCDHGA2Q9Y5H1 932 aa16.8■□□□□ 0.28
RAB5C-201ENST00000346213 PRRT4C9JH25 899 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 E5RJQ4 531 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 NEDD8-MDP1E9PL57 170 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 SLC9A3R1O14745 358 aaPredicted RBP16.79■□□□□ 0.28
RAB5C-201ENST00000346213 THAP12O43422 761 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 RRP9O43818 475 aaKnown RBP16.79■□□□□ 0.28
RAB5C-201ENST00000346213 ADAM23O75077 832 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 KAT7O95251 611 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 PSEN1P49768 467 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 ZBED6P86452 979 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 TRIP4Q15650 581 aaPredicted RBP16.79■□□□□ 0.28
RAB5C-201ENST00000346213 C2orf27AQ580R0 203 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 KLHDC7AQ5VTJ3 777 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 FYB2Q5VWT5 728 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 TMEM92Q6UXU6 159 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 FMNL3Q8IVF7 1028 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 SCUBE3Q8IX30 993 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 CCDC33Q8N5R6 958 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 LSM14BQ9BX40 385 aaKnown RBP16.79■□□□□ 0.28
RAB5C-201ENST00000346213 ADAM33Q9BZ11 813 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 CNGB3Q9NQW8 809 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 MARK1Q9P0L2 795 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 PPP2R2CQ9Y2T4 447 aa16.79■□□□□ 0.28
RAB5C-201ENST00000346213 GOLGA6L9A6NEM1 432 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 ADH1CP00326 375 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 CISD3P0C7P0 127 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 RALAP11233 206 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 USP8P40818 1118 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 MFAP3P55082 362 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 TSR1Q2NL82 804 aaKnown RBP16.78■□□□□ 0.28
RAB5C-201ENST00000346213 ANO4Q32M45 955 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 SYPL2Q5VXT5 272 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 RAD9BQ6WBX8 426 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 DENND1CQ8IV53 801 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 FAM217AQ8IXS0 508 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 SIX6OS1Q8N1H7 587 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 ALLCQ8N6M5 410 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 IL17RCQ8NAC3 791 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 OTUB2Q96DC9 234 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 PCMTD1Q96MG8 357 aaPredicted RBP16.78■□□□□ 0.28
RAB5C-201ENST00000346213 CPXM1Q96SM3 734 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 ACOX2Q99424 681 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 EDEM3Q9BZQ6 932 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 EPC1Q9H2F5 836 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 ARHGEF4Q9NR80 690 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 NAALADL1Q9UQQ1 740 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 RIF1Q5UIP0 2472 aaKnown RBP16.78■□□□□ 0.28
RAB5C-201ENST00000346213 LAMA1P25391 3075 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 A0A0A0MRY4 1105 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 SOWAHDA6NJG2 315 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 SGK1O00141 431 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 CACNG3O60359 315 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 PENKP01210 267 aaPredicted RBP16.78■□□□□ 0.28
RAB5C-201ENST00000346213 IGLV3-27P01718 113 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 LMNAP02545 664 aaKnown RBP16.78■□□□□ 0.28
RAB5C-201ENST00000346213 TYRP14679 529 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 GAD2Q05329 585 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 PDCLQ13371 301 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 DRAP1Q14919 205 aaPredicted RBP16.78■□□□□ 0.28
RAB5C-201ENST00000346213 BTBD8Q5XKL5 378 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 MSANTD2Q6P1R3 559 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 FAM71AQ8IYT1 594 aa16.78■□□□□ 0.28
RAB5C-201ENST00000346213 ADAM32Q8TC27 787 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms