RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 ZHX1-C8orf76Q96EF9 292 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 PRDM8Q9NQV8 689 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 GPN3Q9UHW5 284 aaPredicted RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 MATN2O00339 956 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 ACAT1P24752 427 aaKnown RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 ADSLP30566 484 aaPredicted RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 CDK7P50613 346 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 PTGES3Q15185 160 aaKnown RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 GRTP1Q5TC63 336 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 RBM44Q6ZP01 1051 aaKnown RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 FEZF2Q8TBJ5 459 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 CPA5Q8WXQ8 436 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 CELF4Q9BZC1 486 aaKnown RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 POLR3FQ9H1D9 316 aaPredicted RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 KCTD10Q9H3F6 313 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 RIBC2Q9H4K1 309 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 L2HGDHQ9H9P8 463 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 BARHL2Q9NY43 387 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 ARHGAP28Q9P2N2 729 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 RPS6KA6Q9UK32 745 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 SYNPO2Q9UMS6 1093 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 ZNF518AQ6AHZ1 1483 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 SLC16A4O15374 487 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 CCNKO75909 580 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 SCGNO76038 276 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 COMTP21964 271 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 TWF1Q12792 350 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 TXNRD1Q16881 649 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 C1orf189Q5VU69 101 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 SPATA2LQ8IUW3 424 aaPredicted RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 SLC7A14Q8TBB6 771 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 SLC9A6Q92581 669 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 COPS7BQ9H9Q2 264 aaPredicted RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 CCNB1IP1Q9NPC3 277 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 TMEM216Q9P0N5 145 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 LSM7Q9UK45 103 aaKnown RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 PCDHGA10Q9Y5H3 936 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 A2MP01023 1474 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 WFS1O76024 890 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 ASS1P00966 412 aaKnown RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 ELF3P78545 371 aaPredicted RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 CAMK2GQ13555 558 aaPredicted RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 PCSK7Q16549 785 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 SNAP23O00161 211 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 GPD1P21695 349 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 MUTP22033 750 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 CBX5P45973 191 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 ALDH1A3P47895 512 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 ALDH3A2P51648 485 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 NFIAQ12857 509 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 CBFBQ13951 182 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 SMAD1Q15797 465 aaKnown RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 TTC23Q5W5X9 447 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 ANKRD26P1Q6NSI1 321 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 TTC30AQ86WT1 665 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 RAB43Q86YS6 212 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 RTKN2Q8IZC4 609 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 SLC20A1Q8WUM9 679 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 ZNF669Q96BR6 464 aaPredicted RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 SLC38A2Q96QD8 506 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 KCNK4Q9NYG8 393 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 FBXO40Q9UH90 709 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 PCDHB2Q9Y5E7 798 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 UQCRBP14927 111 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 ZNF12P17014 697 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 PTPN1P18031 435 aaKnown RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 VCLP18206 1134 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 ADAM17P78536 824 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 CWF19L1Q69YN2 538 aaKnown RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 KDELC2Q7Z4H8 507 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 REXO1L1PQ8IX06 675 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 EIF2AK1Q9BQI3 630 aaKnown RBP8.55□□□□□ -1.04
MCPH1-201ENST00000344683 GNPTGQ9UJJ9 305 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 SIK3Q9Y2K2 1263 aa8.55□□□□□ -1.04
MCPH1-201ENST00000344683 KCNH1O95259 989 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 NCAM1P13591 858 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 ALDH5A1P51649 535 aaPredicted RBP8.54□□□□□ -1.04
MCPH1-201ENST00000344683 NAA20P61599 178 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 GRSF1Q12849 480 aaKnown RBP eCLIP8.54□□□□□ -1.04
MCPH1-201ENST00000344683 PDK2Q15119 407 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 RIPOR1Q6ZS17 1223 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 STK32CQ86UX6 486 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 FAM71DQ8N9W8 422 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 KIF12Q96FN5 646 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 SEPHS2Q99611 448 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 DCLK3Q9C098 648 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 CCDC189A1A4V9 331 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 SRRM3A6NNA2 597 aaPredicted RBP8.54□□□□□ -1.04
MCPH1-201ENST00000344683 PDGFRAP16234 1089 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 GCLCP48506 637 aaPredicted RBP8.54□□□□□ -1.04
MCPH1-201ENST00000344683 NAB1Q13506 487 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.54□□□□□ -1.04
MCPH1-201ENST00000344683 MYO1HQ8N1T3 1032 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 SLC30A5Q8TAD4 765 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 LRRC40Q9H9A6 602 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 ZNF112Q9UJU3 913 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 C3orf18Q9UK00 162 aa8.54□□□□□ -1.04
MCPH1-201ENST00000344683 GNG14A0A1W2PPG7 69 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms