RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PDE4CQ08493 712 aa13.01□□□□□ -0.33
SGCA-202ENST00000344627 SEMA3BQ13214 749 aa13.01□□□□□ -0.33
SGCA-202ENST00000344627 TMEM270Q6UE05 265 aa13.01□□□□□ -0.33
SGCA-202ENST00000344627 ELOA2Q8IYF1 753 aaPredicted RBP13.01□□□□□ -0.33
SGCA-202ENST00000344627 CHPFQ8IZ52 775 aa13.01□□□□□ -0.33
SGCA-202ENST00000344627 SIX6OS1Q8N1H7 587 aa13.01□□□□□ -0.33
SGCA-202ENST00000344627 RNF139Q8WU17 664 aa13.01□□□□□ -0.33
SGCA-202ENST00000344627 RLN3Q8WXF3 142 aa13.01□□□□□ -0.33
SGCA-202ENST00000344627 ADAM33Q9BZ11 813 aa13.01□□□□□ -0.33
SGCA-202ENST00000344627 ULBP1Q9BZM6 244 aa13.01□□□□□ -0.33
SGCA-202ENST00000344627 MARCH2Q9P0N8 246 aa13.01□□□□□ -0.33
SGCA-202ENST00000344627 WASF3Q9UPY6 502 aa13.01□□□□□ -0.33
SGCA-202ENST00000344627 SLC27A6Q9Y2P4 619 aa13.01□□□□□ -0.33
SGCA-202ENST00000344627 NEUROG3Q9Y4Z2 214 aa13.01□□□□□ -0.33
SGCA-202ENST00000344627 ZFHX4Q86UP3 3567 aa13□□□□□ -0.33
SGCA-202ENST00000344627 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13□□□□□ -0.33
SGCA-202ENST00000344627 PPP1R3GB7ZBB8 358 aa13□□□□□ -0.33
SGCA-202ENST00000344627 TULP2O00295 520 aa13□□□□□ -0.33
SGCA-202ENST00000344627 XPO1O14980 1071 aaKnown RBP13□□□□□ -0.33
SGCA-202ENST00000344627 GREM1O60565 184 aa13□□□□□ -0.33
SGCA-202ENST00000344627 OPHN1O60890 802 aa13□□□□□ -0.33
SGCA-202ENST00000344627 ZBED1O96006 694 aa13□□□□□ -0.33
SGCA-202ENST00000344627 VDRP11473 427 aa13□□□□□ -0.33
SGCA-202ENST00000344627 LCP1P13796 627 aa13□□□□□ -0.33
SGCA-202ENST00000344627 DGKGP49619 791 aa13□□□□□ -0.33
SGCA-202ENST00000344627 ZNF445P59923 1031 aa13□□□□□ -0.33
SGCA-202ENST00000344627 ZNF33AQ06730 810 aa13□□□□□ -0.33
SGCA-202ENST00000344627 BST2Q10589 180 aaKnown RBP13□□□□□ -0.33
SGCA-202ENST00000344627 STARD3Q14849 445 aa13□□□□□ -0.33
SGCA-202ENST00000344627 WDR45BQ5MNZ6 344 aa13□□□□□ -0.33
SGCA-202ENST00000344627 TOGARAM2Q6ZUX3 1019 aa13□□□□□ -0.33
SGCA-202ENST00000344627 DENND1CQ8IV53 801 aa13□□□□□ -0.33
SGCA-202ENST00000344627 TMEFF1Q8IYR6 380 aa13□□□□□ -0.33
SGCA-202ENST00000344627 IPO4Q8TEX9 1081 aaKnown RBP13□□□□□ -0.33
SGCA-202ENST00000344627 UCMAQ8WVF2 138 aa13□□□□□ -0.33
SGCA-202ENST00000344627 ZNF419Q96HQ0 510 aaPredicted RBP13□□□□□ -0.33
SGCA-202ENST00000344627 MBD1Q9UIS9 605 aaPredicted RBP13□□□□□ -0.33
SGCA-202ENST00000344627 FBXO10Q9UK96 956 aa13□□□□□ -0.33
SGCA-202ENST00000344627 KIAA1257Q9ULG3 409 aa13□□□□□ -0.33
SGCA-202ENST00000344627 CNOT1A5YKK6 2376 aaKnown RBP13□□□□□ -0.33
SGCA-202ENST00000344627 A0A1W2PQF6 199 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 FAM221BA6H8Z2 402 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 PATE3B3GLJ2 98 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 PIK3R2O00459 728 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 TIMM44O43615 452 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 NDUFS2O75306 463 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 CYBBP04839 570 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 GABRG2P18507 467 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 OXTRP30559 389 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 PTGER3P43115 390 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 RGS7P49802 495 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 ADIGQ0VDE8 80 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 FOXC1Q12948 553 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 PAK1Q13153 545 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 MORC3Q14149 939 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 EIF4HQ15056 248 aaKnown RBP12.99□□□□□ -0.33
SGCA-202ENST00000344627 ZNF423Q2M1K9 1284 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 UAP1L1Q3KQV9 507 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 RAB41Q5JT25 222 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 EGFLAMQ63HQ2 1017 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 TTI2Q6NXR4 508 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 RRAGAQ7L523 313 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 PIP4P1Q86T03 277 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 FMNL3Q8IVF7 1028 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 CADM4Q8NFZ8 388 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 EDEM1Q92611 657 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 SRRTQ9BXP5 876 aaKnown RBP12.99□□□□□ -0.33
SGCA-202ENST00000344627 SLC2A11Q9BYW1 496 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 IRX2Q9BZI1 471 aaPredicted RBP12.99□□□□□ -0.33
SGCA-202ENST00000344627 PCED1AQ9H1Q7 454 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 CAPN10Q9HC96 672 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 DNAAF2Q9NVR5 837 aaKnown RBP12.99□□□□□ -0.33
SGCA-202ENST00000344627 CALCOCO1Q9P1Z2 691 aa12.99□□□□□ -0.33
SGCA-202ENST00000344627 CEP192Q8TEP8 1941 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 IGHV1OR15-9A0A0B4J2B8 117 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 M0QYV0 167 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 FGFR1OPO95684 399 aaKnown RBP12.98□□□□□ -0.33
SGCA-202ENST00000344627 GNA14O95837 355 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 CALCAP01258 141 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 KLKB1P03952 638 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 CFIP05156 583 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 SETSIPP0DME0 302 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 KRT5P13647 590 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 BMP6P22004 513 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 BRD2P25440 801 aaKnown RBP12.98□□□□□ -0.33
SGCA-202ENST00000344627 HARS2P49590 506 aaKnown RBP12.98□□□□□ -0.33
SGCA-202ENST00000344627 KCNH2Q12809 1159 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 CAMK4Q16566 473 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 BSPRYQ5W0U4 402 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 Q6ZNB5 142 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 ARMCX6Q7L4S7 300 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 DDI1Q8WTU0 396 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 OLA1Q9NTK5 396 aaKnown RBP12.98□□□□□ -0.33
SGCA-202ENST00000344627 TMEM74BQ9NUR3 256 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 AGO1Q9UL18 857 aaKnown RBP12.98□□□□□ -0.33
SGCA-202ENST00000344627 MSRB2Q9Y3D2 182 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.98□□□□□ -0.33
SGCA-202ENST00000344627 PI4KAP42356 2102 aa12.98□□□□□ -0.33
SGCA-202ENST00000344627 PRRT4C9JH25 899 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms