RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ZNF425Q6IV72 752 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CNSTQ6PJW8 725 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 LSMEM1Q8N8F7 131 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 C15orf40Q8WUR7 153 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PIK3R3Q92569 461 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ERP44Q9BS26 406 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ZFYVE9O95405 1425 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 A0A0G2JND7 137 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ARGFXA6NJG6 315 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SNAP29O95721 258 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CTHP32929 405 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TMBIM6P55061 237 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 NAA20P61599 178 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PRKCEQ02156 737 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 VAC14Q08AM6 782 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TRIM32Q13049 653 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TRIP10Q15642 601 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TCP11X2Q5H9J9 407 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TMEM31Q5JXX7 168 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 BBS7Q8IWZ6 715 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 KIAA1958Q8N8K9 716 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 LILRB4Q8NHJ6 448 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF317Q96PQ6 595 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SPRTNQ9H040 489 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SMYD3Q9H7B4 428 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 UNKLQ9H9P5 680 aaKnown RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 DDX4Q9NQI0 724 aaKnown RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SPANXA1Q9NS26 97 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SFMBT1Q9UHJ3 866 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 POLR3HQ9Y535 204 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 EXOC3O60645 756 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ADAP00813 363 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 RHAGQ02094 409 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CYP51A1Q16850 503 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ZRANB3Q5FWF4 1079 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 KANSL1Q7Z3B3 1105 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 MAML2Q8IZL2 1156 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PPHLN1Q8NEY8 458 aaKnown RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ASB13Q8WXK3 278 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 A0A0J9YVX5 310 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PSMD11O00231 422 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PTTG1O95997 202 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 MTHFD1P11586 935 aaKnown RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 RAB3AP20336 220 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CASP4P49662 377 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CDC20Q12834 499 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ITPRIPL1Q6GPH6 555 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 DYMQ7RTS9 669 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 C11orf96Q7Z7L8 435 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PIWIL2Q8TC59 973 aaKnown RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 MYLK2Q9H1R3 596 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SELENONQ9NZV5 590 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 AVILO75366 819 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SERPING1P05155 500 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ALAS1P13196 640 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CNPY1Q3B7I2 92 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PDPK2PQ6A1A2 396 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 MZT2AQ6P582 158 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CATSPER4Q7RTX7 472 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 C14orf80Q86SX3 495 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 RAB43Q86YS6 212 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 BBS1Q8NFJ9 593 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 MAFIPQ8WZ33 124 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 GLG1Q92896 1179 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 KRCC1Q9NPI7 259 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PNPLA3Q9NST1 481 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 KCNK3O14649 394 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 MAPK12P53778 367 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TCIRG1Q13488 830 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PUM3Q15397 648 aaKnown RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 KCNK18Q7Z418 384 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 FRMD5Q7Z6J6 570 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 GALNT7Q86SF2 657 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CABP7Q86V35 215 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TBC1D10CQ8IV04 446 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 RANBP9Q96S59 729 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 KCNE2Q9Y6J6 123 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ARAP1Q96P48 1450 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 GNAT3A8MTJ3 354 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PSMD12O00232 456 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 IGF2BP3O00425 579 aaKnown RBP eCLIP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CST8O60676 142 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 FBXO21O94952 628 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 MYL3P08590 195 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 AMPD2Q01433 879 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 BIKQ13323 160 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TAF12Q16514 161 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 EAPPQ56P03 285 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 APOA5Q6Q788 366 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 KYAT3Q6YP21 454 aaKnown RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 LRRC74BQ6ZQY2 392 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TMED9Q9BVK6 235 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 DENND2DQ9H6A0 471 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 A0A0A6YYK5 440 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 POLR1CO15160 346 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CYP27B1O15528 508 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 NMT1P30419 496 aaKnown RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 MLLT6P55198 1093 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 OTUD7BQ6GQQ9 843 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 FBXO42Q6P3S6 717 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms