RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PLA2G6O60733 806 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 TBCELQ5QJ74 424 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 GANQ9H2C0 597 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 STK36Q9NRP7 1315 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 A0A1W2PQC6 194 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 EGFRP00533 1210 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 CCR4P51679 360 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 B3GNT6Q6ZMB0 384 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 ZNF677Q86XU0 584 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 SLC25A41Q8N5S1 370 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 SLC40A1Q9NP59 571 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 NCKAP1Q9Y2A7 1128 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 ABCB11O95342 1321 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 AKR1B1P15121 316 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 NEDD8Q15843 81 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 C4orf33Q8N1A6 199 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 KIF2BQ8N4N8 673 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 REEP1Q9H902 201 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 ERGIC3Q9Y282 383 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.06■□□□□ 0.48
SMAD4-201ENST00000342988 SFI1A8K8P3 1242 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 EPN2O95208 641 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 MYBL2P10244 700 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 ZNF177Q13360 481 aaPredicted RBP18.06■□□□□ 0.48
SMAD4-201ENST00000342988 USP17L2Q6R6M4 530 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 APOBEC3FQ8IUX4 373 aaKnown RBP18.06■□□□□ 0.48
SMAD4-201ENST00000342988 SEPT5Q99719 369 aaPredicted RBP18.06■□□□□ 0.48
SMAD4-201ENST00000342988 SHROOM2Q13796 1616 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 SIN3BO75182 1162 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 MUTP22033 750 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 PTPN3P26045 913 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 MAGEA4P43358 317 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 ILF3Q12906 894 aaKnown RBP eCLIP18.06■□□□□ 0.48
SMAD4-201ENST00000342988 KBTBD8Q8NFY9 601 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 TESCQ96BS2 214 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 MAGEB10Q96LZ2 347 aaPredicted RBP18.06■□□□□ 0.48
SMAD4-201ENST00000342988 AASDHPPTQ9NRN7 309 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 CHKBQ9Y259 395 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 LYVE1Q9Y5Y7 322 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 KIAA0232Q92628 1395 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 PCP4L1A6NKN8 68 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 ASS1P00966 412 aaKnown RBP18.05■□□□□ 0.48
SMAD4-201ENST00000342988 MYCP01106 439 aaPredicted RBP18.05■□□□□ 0.48
SMAD4-201ENST00000342988 SMIM11AP58511 58 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 TXNDC11Q6PKC3 985 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 NT5C1AQ9BXI3 368 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 JMJD4Q9H9V9 463 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 N6AMT1Q9Y5N5 214 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 GARTP22102 1010 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 RGS8P57771 180 aaPredicted RBP18.05■□□□□ 0.48
SMAD4-201ENST00000342988 RNF44Q7L0R7 432 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 SLC35G2Q8TBE7 412 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 NQO1P15559 274 aaKnown RBP18.05■□□□□ 0.48
SMAD4-201ENST00000342988 IFNAR1P17181 557 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 MECP2P51608 486 aaKnown RBP18.05■□□□□ 0.48
SMAD4-201ENST00000342988 SNRNP48Q6IEG0 339 aaKnown RBP18.05■□□□□ 0.48
SMAD4-201ENST00000342988 ZNF746Q6NUN9 644 aaPredicted RBP18.05■□□□□ 0.48
SMAD4-201ENST00000342988 MCOLN3Q8TDD5 553 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 NSMCE2Q96MF7 247 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 INTS2Q9H0H0 1204 aaKnown RBP18.05■□□□□ 0.48
SMAD4-201ENST00000342988 SCN8AQ9UQD0 1980 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 ESYT3A0FGR9 886 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 CLRN2A0PK11 232 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 SLC16A4O15374 487 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 BBOX1O75936 387 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 ACTR3P61158 418 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 MROH9Q5TGP6 573 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 ST3GAL5Q9UNP4 418 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 PDE8BO95263 885 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 ANKRD26P1Q6NSI1 321 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 FAR1Q8WVX9 515 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 TAGLN3Q9UI15 199 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 PLCL2Q9UPR0 1127 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 LDLRP01130 860 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 NLGN1Q8N2Q7 840 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 SHOC2Q9UQ13 582 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 PGRMC2O15173 223 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 FDX1P10109 184 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 GRHL2Q6ISB3 625 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 SPAG16Q8N0X2 631 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 APEX2Q9UBZ4 518 aa18.05■□□□□ 0.48
SMAD4-201ENST00000342988 TRIM38O00635 465 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 ZNF208O43345 1280 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 OR2L5Q8NG80 312 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 FIG4Q92562 907 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 KCND2Q9NZV8 630 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 PIN4Q9Y237 131 aaKnown RBP18.04■□□□□ 0.48
SMAD4-201ENST00000342988 LRCH1Q9Y2L9 728 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 SSTP61278 116 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 LXNQ9BS40 222 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 RHOBTB2Q9BYZ6 727 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 CHMP1AQ9HD42 196 aaPredicted RBP18.04■□□□□ 0.48
SMAD4-201ENST00000342988 UPB1Q9UBR1 384 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 O00370 1275 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 OPLAHO14841 1288 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 GAS2O43903 313 aaKnown RBP18.04■□□□□ 0.48
SMAD4-201ENST00000342988 MYBPC1Q00872 1141 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 AKAP14Q86UN6 197 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 TBC1D24Q9ULP9 559 aa18.04■□□□□ 0.48
SMAD4-201ENST00000342988 PCDHA6Q9UN73 950 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms