RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 LDHBP07195 334 aaKnown RBP19.08■□□□□ 0.64
SMPD1-201ENST00000342245 KCNJ8Q15842 424 aa19.08■□□□□ 0.64
SMPD1-201ENST00000342245 SMIM5Q71RC9 77 aa19.08■□□□□ 0.64
SMPD1-201ENST00000342245 SETD3Q86TU7 594 aaPredicted RBP19.08■□□□□ 0.64
SMPD1-201ENST00000342245 KYQ8NBH2 561 aa19.08■□□□□ 0.64
SMPD1-201ENST00000342245 RSAD2Q8WXG1 361 aa19.08■□□□□ 0.64
SMPD1-201ENST00000342245 ZNF641Q96N77 438 aaPredicted RBP19.08■□□□□ 0.64
SMPD1-201ENST00000342245 MTMR4Q9NYA4 1195 aa19.08■□□□□ 0.64
SMPD1-201ENST00000342245 PCDHB2Q9Y5E7 798 aa19.08■□□□□ 0.64
SMPD1-201ENST00000342245 TEX264Q9Y6I9 313 aa19.08■□□□□ 0.64
SMPD1-201ENST00000342245 A0A1B0GTW7 788 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 KRBA1A5PL33 1030 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 KBTBD13C9JR72 458 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 H3BMQ9 156 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 TOM1L1O75674 476 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 BMXP51813 675 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 ERFEQ4G0M1 354 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 PLEKHA7Q6IQ23 1121 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 LYSMD3Q7Z3D4 306 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 FIBCD1Q8N539 461 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 COG8Q96MW5 612 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 SLC13A1Q9BZW2 595 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 ZNRF3Q9ULT6 936 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 LOC100653049A0A140TA62 436 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 KRT34O76011 436 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 NCF2P19878 526 aaPredicted RBP19.07■□□□□ 0.64
SMPD1-201ENST00000342245 GABRB2P47870 512 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 MAMLD1Q13495 774 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 PIGGQ5H8A4 983 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 TEDDM1Q5T9Z0 273 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 HAUS6Q7Z4H7 955 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 ACCSQ96QU6 501 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 HSD17B14Q9BPX1 270 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 IMPG2Q9BZV3 1241 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 CXorf21Q9HAI6 301 aa19.07■□□□□ 0.64
SMPD1-201ENST00000342245 CYB561D2O14569 222 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 SLC22A2O15244 555 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 TLR3O15455 904 aaKnown RBP19.06■□□□□ 0.64
SMPD1-201ENST00000342245 ATE1O95260 518 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 KRT5P13647 590 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 RPL22P35268 128 aaKnown RBP19.06■□□□□ 0.64
SMPD1-201ENST00000342245 SERPINB9P50453 376 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 KCNQ4P56696 695 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 GCNT1Q02742 428 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 GAD2Q05329 585 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 KLF10Q13118 480 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 IKBKEQ14164 716 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 FASTKD1Q53R41 847 aaKnown RBP19.06■□□□□ 0.64
SMPD1-201ENST00000342245 MBLAC2Q68D91 279 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 SCARA3Q6AZY7 606 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 TTC30AQ86WT1 665 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 FEZF2Q8TBJ5 459 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 CPA5Q8WXQ8 436 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 LENG9Q96B70 501 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 MROQ9BYG7 248 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 TMEM8AQ9HCN3 771 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 QPCTLQ9NXS2 382 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 IFT52Q9Y366 437 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 USP17L15C9J2P7 530 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 USP17L13C9JLJ4 530 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 USP17L11C9JVI0 530 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 USP17L18D6R9N7 530 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 USP17L22D6RA61 530 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 USP17L17D6RBQ6 530 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 USP17L19D6RCP7 530 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 USP17L20D6RJB6 530 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 PI4K2BG5E9Z4 385 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 TNFRSF10AO00220 468 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 KCNQ2O43526 872 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 FOSP01100 380 aaPredicted RBP19.06■□□□□ 0.64
SMPD1-201ENST00000342245 SERPINE1P05121 402 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 PROZP22891 400 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 ME2P23368 584 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 USP17L24Q0WX57 530 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 PPP2R5DQ14738 602 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 OXA1LQ15070 435 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 USP17L6PQ6QN14 398 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 MAPKAPK5Q8IW41 473 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 COLGALT2Q8IYK4 626 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 EFCAB3Q8N7B9 438 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 PPM1NQ8N819 430 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 RNF169Q8NCN4 708 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 BHLHE22Q8NFJ8 381 aaPredicted RBP19.06■□□□□ 0.64
SMPD1-201ENST00000342245 ZNF778Q96MU6 729 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 SH3GL1Q99961 368 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 PARVAQ9NVD7 372 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 RIC8BQ9NVN3 520 aa19.06■□□□□ 0.64
SMPD1-201ENST00000342245 SCN4AP35499 1836 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.05■□□□□ 0.64
SMPD1-201ENST00000342245 ZC3H11AO75152 810 aaKnown RBP eCLIP19.05■□□□□ 0.64
SMPD1-201ENST00000342245 TMEM63AO94886 807 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 ATP6V0D1P61421 351 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 CYP2A13Q16696 494 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 ANKRD26P1Q6NSI1 321 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 CTAGE3PQ8IX95 158 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 NDUFAF2Q8N183 169 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 NACC1Q96RE7 527 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 EHD1Q9H4M9 534 aa19.05■□□□□ 0.64
SMPD1-201ENST00000342245 MRPL40Q9NQ50 206 aaKnown RBP19.05■□□□□ 0.64
SMPD1-201ENST00000342245 ANLNQ9NQW6 1124 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms