RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 EFHC1Q5JVL4 640 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 SWSAP1Q6NVH7 229 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 SLC38A6Q8IZM9 456 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 HELQQ8TDG4 1101 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 KRT35Q92764 455 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 STRA6Q9BX79 667 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 CDH19Q9H159 772 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 XAB2Q9HCS7 855 aaKnown RBP12.25□□□□□ -0.45
RTN3-203ENST00000341307 GCNT4Q9P109 453 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 SYNGAP1Q96PV0 1343 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 KIAA1217Q5T5P2 1943 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 SLC16A3O15427 465 aaKnown RBP12.24□□□□□ -0.45
RTN3-203ENST00000341307 SIN3BO75182 1162 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 SORBS2O94875 1100 aaKnown RBP12.24□□□□□ -0.45
RTN3-203ENST00000341307 FARP2O94887 1054 aaPredicted RBP12.24□□□□□ -0.45
RTN3-203ENST00000341307 RAG1P15918 1043 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 PRKACBP22694 351 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 DLG4P78352 724 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 CTBSQ01459 385 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 KRT76Q01546 638 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 SIX1Q15475 284 aaPredicted RBP12.24□□□□□ -0.45
RTN3-203ENST00000341307 DNAL1Q4LDG9 190 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 CBWD6Q4V339 395 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 CBWD3Q5JTY5 395 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 CBWD5Q5RIA9 395 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 RGMBQ6NW40 437 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 C4orf19Q8IY42 314 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 LILRB4Q8NHJ6 448 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 PSPC1Q8WXF1 523 aaKnown RBP12.24□□□□□ -0.45
RTN3-203ENST00000341307 HSPH1Q92598 858 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 CBWD1Q9BRT8 395 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 EBF1Q9UH73 591 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 RAB26Q9ULW5 256 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 PCDHA10Q9Y5I2 948 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 CSADQ9Y600 493 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 TRPM7Q96QT4 1865 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 H3BNX3 289 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 LRRN2O75325 713 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 FAM58BPP0C7Q3 252 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 PLS3P13797 630 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 ADRA1DP25100 572 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 IVDP26440 423 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 IREB2P48200 963 aaKnown RBP12.24□□□□□ -0.45
RTN3-203ENST00000341307 JAK3P52333 1124 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 KDSRQ06136 332 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 TMTC4Q5T4D3 741 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 NEK10Q6ZWH5 1172 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 CCDC60Q8IWA6 550 aaPredicted RBP12.24□□□□□ -0.45
RTN3-203ENST00000341307 TBC1D15Q8TC07 691 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 RFFLQ8WZ73 363 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 GPRASP2Q96D09 838 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 SLC10A4Q96EP9 437 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 CAPNS2Q96L46 248 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 ZNF512Q96ME7 567 aaPredicted RBP12.24□□□□□ -0.45
RTN3-203ENST00000341307 DCUN1D5Q9BTE7 237 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 B3GNT4Q9C0J1 378 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 SIX2Q9NPC8 291 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 MRGBPQ9NV56 204 aa12.24□□□□□ -0.45
RTN3-203ENST00000341307 OTOFQ9HC10 1997 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 FAM155AB1AL88 458 aaPredicted RBP12.23□□□□□ -0.45
RTN3-203ENST00000341307 ATP2A1O14983 1001 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 LYPLA2O95372 231 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 PARNO95453 639 aaKnown RBP12.23□□□□□ -0.45
RTN3-203ENST00000341307 PRDX6P30041 224 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 ALDH1A3P47895 512 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 YWHAGP61981 247 aaKnown RBP eCLIP12.23□□□□□ -0.45
RTN3-203ENST00000341307 TTC23LQ6PF05 361 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 HAUS6Q7Z4H7 955 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 MMAAQ8IVH4 418 aaKnown RBP12.23□□□□□ -0.45
RTN3-203ENST00000341307 ELMOD1Q8N336 334 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 LNX1Q8TBB1 728 aaPredicted RBP12.23□□□□□ -0.45
RTN3-203ENST00000341307 ARHGEF26Q96DR7 871 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 MED30Q96HR3 178 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 C9orf72Q96LT7 481 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 IRF2BPLQ9H1B7 796 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 JPH1Q9HDC5 661 aaPredicted RBP12.23□□□□□ -0.45
RTN3-203ENST00000341307 MOSPD1Q9UJG1 213 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 GNPTGQ9UJJ9 305 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 KIAA1257Q9ULG3 409 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 DNAJC16Q9Y2G8 782 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 IFT52Q9Y366 437 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 PCDHGA11Q9Y5H2 935 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 LCTP09848 1927 aa12.23□□□□□ -0.45
RTN3-203ENST00000341307 A0A1W2PPM1 405 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 ARHGAP33O14559 1287 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 UGT1A9O60656 530 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 MYL2P10916 166 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 UGT1A6P19224 532 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 UGT1A1P22309 533 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 UGT1A4P22310 534 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 SFNP31947 248 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 UGT1A3P35503 534 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 UGT1A5P35504 534 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 CPOXP36551 454 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 ITGA8P53708 1063 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 PDK1Q15118 436 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 OASLQ15646 514 aaKnown RBP12.22□□□□□ -0.45
RTN3-203ENST00000341307 XKR5Q6UX68 686 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 CCDC81Q6ZN84 652 aa12.22□□□□□ -0.45
RTN3-203ENST00000341307 STXBP4Q6ZWJ1 553 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms