RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 ACTR8Q9H981 624 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 KCNQ5Q9NR82 932 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 DDX43Q9NXZ2 648 aaKnown RBP12.81□□□□□ -0.36
OTOF-203ENST00000339598 USE1Q9NZ43 259 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 RNF103O00237 685 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 SPTLC1O15269 473 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 SMNDC1O75940 238 aaKnown RBP eCLIP12.81□□□□□ -0.36
OTOF-203ENST00000339598 VAPBO95292 243 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 CCDC142Q17RM4 750 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 SLC44A4Q53GD3 710 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 WASHC2DQ5SRD0 308 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 C11orf74Q86VG3 221 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 MAP4K3Q8IVH8 894 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 APLFQ8IW19 511 aaPredicted RBP12.81□□□□□ -0.36
OTOF-203ENST00000339598 DNERQ8NFT8 737 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 SEPT8Q92599 483 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 C10orf88Q9H8K7 445 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 TAS2R14Q9NYV8 317 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 ITGA11Q9UKX5 1188 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 WDR27A2RRH5 827 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 KRT87PA6NCN2 255 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 CASTOR2A6NHX0 329 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 ANKRD63C9JTQ0 380 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 IMPDH2P12268 514 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 CACNA2D1P54289 1103 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 LRRC55Q6ZSA7 311 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 PLEKHH3Q7Z736 793 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 FUKQ8N0W3 1084 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 PRCCQ92733 491 aaPredicted RBP12.81□□□□□ -0.36
OTOF-203ENST00000339598 OXNAD1Q96HP4 312 aaPredicted RBP12.81□□□□□ -0.36
OTOF-203ENST00000339598 MTIF3Q9H2K0 278 aaKnown RBP12.81□□□□□ -0.36
OTOF-203ENST00000339598 ATXN3LQ9H3M9 355 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 VPS28Q9UK41 221 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 WTIPA6NIX2 430 aaPredicted RBP12.81□□□□□ -0.36
OTOF-203ENST00000339598 CBX4O00257 560 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 DCXO43602 365 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 PDE5AO76074 875 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 CELF2O95319 508 aaKnown RBP12.81□□□□□ -0.36
OTOF-203ENST00000339598 EIF4BP23588 611 aaKnown RBP12.81□□□□□ -0.36
OTOF-203ENST00000339598 POU1F1P28069 291 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 SLC34A1Q06495 639 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 TCHHL1Q5QJ38 904 aaPredicted RBP12.81□□□□□ -0.36
OTOF-203ENST00000339598 EIF1ADQ8N9N8 165 aaKnown RBP12.81□□□□□ -0.36
OTOF-203ENST00000339598 PDGFCQ9NRA1 345 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 GIMAP4Q9NUV9 329 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 NMRK1Q9NWW6 199 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 RAD54BQ9Y620 910 aa12.81□□□□□ -0.36
OTOF-203ENST00000339598 RCCD1A6NED2 376 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 APOC4-APOC2K7ER74 178 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 USP12O75317 370 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 APOC2P02655 101 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 SERPINF2P08697 491 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 RAD23AP54725 363 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 C1orf186Q6ZWK4 172 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 TFAP2DQ7Z6R9 452 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 ADAM32Q8TC27 787 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 PPP2R3CQ969Q6 453 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 UBXN6Q9BZV1 441 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 SAE1Q9UBE0 346 aaPredicted RBP12.8□□□□□ -0.36
OTOF-203ENST00000339598 LRCH1Q9Y2L9 728 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 KLRC4O43908 158 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 ZNF682O95780 498 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 AKAP5P24588 427 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 RBL1P28749 1068 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 TBCELQ5QJ74 424 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 APOBEC3HQ6NTF7 200 aaKnown RBP12.8□□□□□ -0.36
OTOF-203ENST00000339598 DEFB106AQ8N104 65 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 B3GALNT2Q8NCR0 500 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 MRPS31Q92665 395 aaKnown RBP12.8□□□□□ -0.36
OTOF-203ENST00000339598 CTNNAL1Q9UBT7 734 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 SAC3D1A6NKF1 404 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 STRNO43815 780 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 ZNF286BP0CG31 522 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 DSG3P32926 999 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 ALDH5A1P51649 535 aaPredicted RBP12.8□□□□□ -0.36
OTOF-203ENST00000339598 SLC16A1P53985 500 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 RHOAP61586 193 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 NIPA1Q7RTP0 329 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 KCNMB4Q86W47 210 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 FAM9CQ8IZT9 166 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 SEPHS2Q99611 448 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 ELOVL6Q9H5J4 265 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 RERGLQ9H628 205 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 RMND5AQ9H871 391 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 TRPM5Q9NZQ8 1165 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 PPRC1Q5VV67 1664 aaKnown RBP12.8□□□□□ -0.36
OTOF-203ENST00000339598 RHOCP08134 193 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 MBL2P11226 248 aaPredicted RBP12.8□□□□□ -0.36
OTOF-203ENST00000339598 RENBPP51606 427 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 DLG4P78352 724 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 RRP1BQ14684 758 aaKnown RBP12.8□□□□□ -0.36
OTOF-203ENST00000339598 TMEM132BQ14DG7 1078 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 OTUD3Q5T2D3 398 aaPredicted RBP12.8□□□□□ -0.36
OTOF-203ENST00000339598 ZNF470Q6ECI4 717 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 ZFPM1Q8IX07 1006 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 CENPLQ8N0S6 344 aaPredicted RBP12.8□□□□□ -0.36
OTOF-203ENST00000339598 ZCCHC9Q8N567 271 aaKnown RBP12.8□□□□□ -0.36
OTOF-203ENST00000339598 REPS2Q8NFH8 660 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 TADA1Q96BN2 335 aa12.8□□□□□ -0.36
OTOF-203ENST00000339598 YIPF2Q9BWQ6 316 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms