RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ATXN7L3BQ96GX2 97 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 MPHOSPH6Q99547 160 aaKnown RBP17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 B3GNT5Q9BYG0 378 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 PCNTO95613 3336 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 OPHN1O60890 802 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 VTNP04004 478 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 TXNP10599 105 aaKnown RBP17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 TMEM132DQ14C87 1099 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 CA9Q16790 459 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 CCNYQ8ND76 341 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 OR6B3Q8NGW1 331 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 CCDC124Q96CT7 223 aaKnown RBP17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 KIF12Q96FN5 646 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 NT5C1AQ9BXI3 368 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 KCNK13Q9HB14 408 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 CYP4F11Q9HBI6 524 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 COL4A5P29400 1685 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 MEI4A8MW99 385 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 CHADO15335 359 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 ITGBL1O95965 494 aaPredicted RBP17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 GRIA1P42261 906 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 CD151P48509 253 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 TTLL12Q14166 644 aaPredicted RBP17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 BOLA3Q53S33 107 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 MAP1SQ66K74 1059 aaPredicted RBP17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 IRGCQ6NXR0 463 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 C14orf80Q86SX3 495 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 FAM149B1Q96BN6 582 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 ERLEC1Q96DZ1 483 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 MPP4Q96JB8 637 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 PLLPQ9Y342 182 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 WASF2Q9Y6W5 498 aa17.06■□□□□ 0.32
CDC42EP4-201ENST00000335793 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 TRAFD1O14545 582 aaPredicted RBP17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 FAM189A1O60320 539 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 CILPO75339 1184 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 IL18RAPO95256 599 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 APOEP02649 317 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 AMPD1P23109 780 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 GRM1Q13255 1194 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 GJC2Q5T442 439 aaPredicted RBP17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 HEATR6Q6AI08 1181 aaKnown RBP17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 NANOGNBQ7Z5D8 188 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 WDR75Q8IWA0 830 aaKnown RBP17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 POU5F2Q8N7G0 328 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 TRAPPC9Q96Q05 1148 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 DHRS4Q9BTZ2 278 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 TRIM43BA6NCK2 446 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 ACADSP16219 412 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 KCNA4P22459 653 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 NEK3P51956 506 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 RPL10AP62906 217 aaKnown RBP17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 KCNJ11Q14654 390 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 PPP2R5DQ14738 602 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 MAP7D1Q3KQU3 841 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 TSHZ1Q6ZSZ6 1077 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 UNC5BQ8IZJ1 945 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 ZNF276Q8N554 614 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 RBM15BQ8NDT2 890 aaKnown RBP17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 KLRG1Q96E93 195 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 SIKE1Q9BRV8 207 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 SNRNP25Q9BV90 132 aaKnown RBP17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 SPATC1LQ9H0A9 340 aa17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 MYO18AQ92614 2054 aaKnown RBP17.05■□□□□ 0.32
CDC42EP4-201ENST00000335793 LOC100653049A0A140TA62 436 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 KRT34O76011 436 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 PDGFRBP09619 1106 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 CSH1P0DML2 217 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 CSH2P0DML3 217 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 LCP1P13796 627 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 NCF2P19878 526 aaPredicted RBP17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 ETV4P43268 484 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 PHKA2P46019 1235 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 CCNG1P51959 295 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 ATXN1P54253 815 aaKnown RBP17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 PLOD1Q02809 727 aaPredicted RBP17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 GBE1Q04446 702 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 UBAP2LQ14157 1087 aaKnown RBP17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 UNC5AQ6ZN44 842 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 DENND5BQ6ZUT9 1274 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 RSPH3Q86UC2 560 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 CHSY1Q86X52 802 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 SCUBE1Q8IWY4 988 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 MPP5Q8N3R9 675 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 NME8Q8N427 588 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 AGR3Q8TD06 166 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 ATP2A3Q93084 1043 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 MCRS1Q96EZ8 462 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 MAGEB5Q9BZ81 275 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 ADORA2BP29275 332 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 ZNF280AP59817 542 aaPredicted RBP17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 KCTD2Q14681 263 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 DUS1LQ6P1R4 473 aaKnown RBP17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 SESTD1Q86VW0 696 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 FBXO27Q8NI29 283 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 PCDH19Q8TAB3 1148 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 SKA1Q96BD8 255 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 MTBPQ96DY7 904 aa17.04■□□□□ 0.32
CDC42EP4-201ENST00000335793 PTCD3Q96EY7 689 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms