RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 RNASE9P60153 205 aaKnown RBP17.06■□□□□ 0.32
C11orf88-201ENST00000332814 KDSRQ06136 332 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 RING1Q06587 406 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 CCINQ13939 588 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 TAF5Q15542 800 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 SYPL2Q5VXT5 272 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 MMS22LQ6ZRQ5 1243 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 C1orf210Q8IVY1 113 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 CPXM2Q8N436 756 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 NAT16Q8N8M0 369 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 BHMTQ93088 406 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 RNF34Q969K3 372 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 SLC2A13Q96QE2 648 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 DDX50Q9BQ39 737 aaKnown RBP17.06■□□□□ 0.32
C11orf88-201ENST00000332814 C11orf70Q9BRQ4 267 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 NUCKS1Q9H1E3 243 aaKnown RBP17.06■□□□□ 0.32
C11orf88-201ENST00000332814 ARHGEF4Q9NR80 690 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 DEC1Q9P2X7 70 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 RAPGEFL1Q9UHV5 662 aa17.06■□□□□ 0.32
C11orf88-201ENST00000332814 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.06■□□□□ 0.32
C11orf88-201ENST00000332814 SYNJ2BP-COX16A0A087WUM0 186 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 A0A1W2PQJ5 194 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 TYW5A2RUC4 315 aaKnown RBP17.05■□□□□ 0.32
C11orf88-201ENST00000332814 IRAK2O43187 625 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 ATG13O75143 517 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 MOCS2O96007 188 aaPredicted RBP17.05■□□□□ 0.32
C11orf88-201ENST00000332814 EGFP01133 1207 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 TYRP14679 529 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 CCR3P51677 355 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 KLHL30Q0D2K2 578 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 MTAPQ13126 283 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 ANGPT1Q15389 498 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 CLEC16AQ2KHT3 1053 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 C2CD6Q53TS8 623 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 NAIF1Q69YI7 327 aaPredicted RBP17.05■□□□□ 0.32
C11orf88-201ENST00000332814 GRAMD4Q6IC98 578 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 PPP1R2P3Q6NXS1 205 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 XYLT1Q86Y38 959 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 ZNF687Q8N1G0 1237 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 PRSS33Q8NF86 280 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 SLC30A5Q8TAD4 765 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 DDI1Q8WTU0 396 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 CPLX3Q8WVH0 158 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 DNAJC17Q9NVM6 304 aaKnown RBP17.05■□□□□ 0.32
C11orf88-201ENST00000332814 DDIT4Q9NX09 232 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 RRN3Q9NYV6 651 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.05■□□□□ 0.32
C11orf88-201ENST00000332814 MARK1Q9P0L2 795 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 COX16Q9P0S2 106 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 SLC12A6Q9UHW9 1150 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 MIA3Q5JRA6 1907 aa17.05■□□□□ 0.32
C11orf88-201ENST00000332814 RNF40O75150 1001 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 TULP3O75386 442 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 KAT7O95251 611 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 IGLV3-27P01718 113 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 CALB1P05937 261 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 TPM1P09493 284 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 SLC2A3P11169 496 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 NOS2P35228 1153 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 PBX1P40424 430 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 SLC6A11P48066 632 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 SULT1E1P49888 294 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 CENPCQ03188 943 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 FZD5Q13467 585 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 GAB4Q2WGN9 574 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 MPPE1Q53F39 396 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 TDRD12Q587J7 1177 aaKnown RBP17.04■□□□□ 0.32
C11orf88-201ENST00000332814 ADGRF1Q5T601 910 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 Q6ZS52 159 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 SND1Q7KZF4 910 aaKnown RBP eCLIP17.04■□□□□ 0.32
C11orf88-201ENST00000332814 C12orf40Q86WS4 652 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 TTYH3Q9C0H2 523 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 ADAM22Q9P0K1 906 aa17.04■□□□□ 0.32
C11orf88-201ENST00000332814 LUC7L2Q9Y383 392 aaKnown RBP17.04■□□□□ 0.32
C11orf88-201ENST00000332814 ARIH1Q9Y4X5 557 aaPredicted RBP17.04■□□□□ 0.32
C11orf88-201ENST00000332814 ITIH6Q6UXX5 1313 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 TBC1D3BA6NDS4 549 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 H0Y858 1186 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 M0QYT0 321 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 CACNG3O60359 315 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 ACSL4O60488 711 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 UNGP13051 313 aaPredicted RBP17.03■□□□□ 0.32
C11orf88-201ENST00000332814 ABCB4P21439 1286 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 MMP8P22894 467 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 CCR1P32246 355 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 GRIA2P42262 883 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 MATKP42679 507 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 DGKGP49619 791 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 SEC13P55735 322 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 NME3Q13232 169 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 TRIM14Q14142 442 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 IRF2BP2Q7Z5L9 587 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 VPS36Q86VN1 386 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 CCDC117Q8IWD4 279 aaPredicted RBP17.03■□□□□ 0.32
C11orf88-201ENST00000332814 SPEM1Q8N4L4 309 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 ATP6V0D2Q8N8Y2 350 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 ATOH1Q92858 354 aaPredicted RBP17.03■□□□□ 0.32
C11orf88-201ENST00000332814 ACDQ96AP0 544 aa17.03■□□□□ 0.32
C11orf88-201ENST00000332814 FCRL2Q96LA5 508 aaPredicted RBP17.03■□□□□ 0.32
C11orf88-201ENST00000332814 PCDHB18PQ96TA0 734 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms