RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 TMEM173Q86WV6 379 aaPredicted RBP21.03■□□□□ 0.96
RIPPLY3-201ENST00000329553 RSAD2Q8WXG1 361 aa21.03■□□□□ 0.96
RIPPLY3-201ENST00000329553 PWWP2AQ96N64 755 aa21.03■□□□□ 0.96
RIPPLY3-201ENST00000329553 CSPG4P5Q96PW8 444 aa21.03■□□□□ 0.96
RIPPLY3-201ENST00000329553 MICAL3Q7RTP6 2002 aa21.03■□□□□ 0.96
RIPPLY3-201ENST00000329553 DNALI1O14645 258 aaPredicted RBP21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 TGM2P21980 687 aa21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 SLC5A3P53794 718 aa21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 SLMAPQ14BN4 828 aa21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 UBAP2Q5T6F2 1119 aaKnown RBP21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 PSTKQ8IV42 348 aaKnown RBP21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 SCN4BQ8IWT1 228 aa21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 TMEM175Q9BSA9 504 aa21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 CNOT10Q9H9A5 744 aaKnown RBP21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 WDR6Q9NNW5 1121 aaKnown RBP21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 MKI67P46013 3256 aaKnown RBP21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 SHBGP04278 402 aa21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 GOT1P17174 413 aa21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 GJA8P48165 433 aa21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 IFRD2Q12894 506 aaPredicted RBP21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 IKBKEQ14164 716 aa21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 NFE2Q16621 373 aaPredicted RBP21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 DARS2Q6PI48 645 aaKnown RBP21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 FAM71DQ8N9W8 422 aa21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 PGAP3Q96FM1 320 aaPredicted RBP21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 PGLYRP2Q96PD5 576 aa21.02■□□□□ 0.96
RIPPLY3-201ENST00000329553 SF3B1O75533 1304 aaKnown RBP eCLIP21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 C5orf60A6NFR6 353 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 MAP3K6O95382 1288 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 AMPD1P23109 780 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 BCL7CQ8WUZ0 217 aaPredicted RBP21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 PAWRQ96IZ0 340 aaKnown RBP21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 SLC9A7Q96T83 725 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 ANLNQ9NQW6 1124 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 DDIT4Q9NX09 232 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 RRN3Q9NYV6 651 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 TPX2Q9ULW0 747 aaKnown RBP21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 H7C0C1 242 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 RPL22P35268 128 aaKnown RBP21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 ADRA1BP35368 520 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 ATP5OP48047 213 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 NRLP54845 237 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 ROR1Q01973 937 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 CNKSR3Q6P9H4 555 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 TAS1R1Q7RTX1 841 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 ARMC5Q96C12 935 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 PGM2Q96G03 612 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 FUBP3Q96I24 572 aaKnown RBP eCLIP21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 DNAJC17Q9NVM6 304 aaKnown RBP21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 PATJQ8NI35 1801 aa21.01■□□□□ 0.95
RIPPLY3-201ENST00000329553 I6L893 689 aaPredicted RBP21■□□□□ 0.95
RIPPLY3-201ENST00000329553 CLTBP09497 229 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 GPR15P49685 360 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 SLC10A2Q12908 348 aaPredicted RBP21■□□□□ 0.95
RIPPLY3-201ENST00000329553 DDR2Q16832 855 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 SDHAF4Q5VUM1 108 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 ZNF280DQ6N043 979 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 LRRC43Q8N309 656 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 USP29Q9HBJ7 922 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 ETNK2Q9NVF9 386 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21■□□□□ 0.95
RIPPLY3-201ENST00000329553 FBXW11Q9UKB1 542 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 OR6C75A6NL08 312 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 AMHP03971 560 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 STIP1P31948 543 aaKnown RBP21■□□□□ 0.95
RIPPLY3-201ENST00000329553 ARL4AP40617 200 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 PGFP49763 221 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 GBE1Q04446 702 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 SLC29A2Q14542 456 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 LRRC26Q2I0M4 334 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 RTP2Q5QGT7 225 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 DENND2CQ68D51 928 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 RSPO2Q6UXX9 243 aaPredicted RBP21■□□□□ 0.95
RIPPLY3-201ENST00000329553 CNPY4Q8N129 248 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 ATAD1Q8NBU5 361 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 STKLD1Q8NE28 680 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 CENPTQ96BT3 561 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 PCDHB5Q9Y5E4 795 aa21■□□□□ 0.95
RIPPLY3-201ENST00000329553 ARPP19P56211 112 aa20.99■□□□□ 0.95
RIPPLY3-201ENST00000329553 QPCTQ16769 361 aa20.99■□□□□ 0.95
RIPPLY3-201ENST00000329553 EFHC2Q5JST6 749 aa20.99■□□□□ 0.95
RIPPLY3-201ENST00000329553 FAM182AQ5T1J6 154 aa20.99■□□□□ 0.95
RIPPLY3-201ENST00000329553 RNASEH2BQ5TBB1 312 aaKnown RBP20.99■□□□□ 0.95
RIPPLY3-201ENST00000329553 VSTM1Q6UX27 236 aa20.99■□□□□ 0.95
RIPPLY3-201ENST00000329553 RNF139Q8WU17 664 aa20.99■□□□□ 0.95
RIPPLY3-201ENST00000329553 NTAN1Q96AB6 310 aa20.99■□□□□ 0.95
RIPPLY3-201ENST00000329553 RCOR3Q9P2K3 495 aaPredicted RBP20.99■□□□□ 0.95
RIPPLY3-201ENST00000329553 MFHAS1Q9Y4C4 1052 aa20.99■□□□□ 0.95
RIPPLY3-201ENST00000329553 RIPK2O43353 540 aa20.98■□□□□ 0.95
RIPPLY3-201ENST00000329553 DGKIO75912 1065 aa20.98■□□□□ 0.95
RIPPLY3-201ENST00000329553 F9P00740 461 aa20.98■□□□□ 0.95
RIPPLY3-201ENST00000329553 ZFXP17010 805 aaPredicted RBP20.98■□□□□ 0.95
RIPPLY3-201ENST00000329553 YWHAGP61981 247 aaKnown RBP eCLIP20.98■□□□□ 0.95
RIPPLY3-201ENST00000329553 PPARDQ03181 441 aa20.98■□□□□ 0.95
RIPPLY3-201ENST00000329553 ELAVL2Q12926 359 aaKnown RBP20.98■□□□□ 0.95
RIPPLY3-201ENST00000329553 IFT88Q13099 833 aa20.98■□□□□ 0.95
RIPPLY3-201ENST00000329553 TTC9BQ8N6N2 239 aa20.98■□□□□ 0.95
RIPPLY3-201ENST00000329553 DNAJC5GQ8N7S2 189 aa20.98■□□□□ 0.95
RIPPLY3-201ENST00000329553 LRRN4Q8WUT4 740 aa20.98■□□□□ 0.95
RIPPLY3-201ENST00000329553 CDC42EP4Q9H3Q1 356 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms