RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	TRIM17	Q9Y577	477 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	MYL2	P10916	166 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	UNG	P13051	313 aa	Predicted RBP	12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	NPR3	P17342	541 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	WEE1	P30291	646 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	ARHGAP1	Q07960	439 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	C9orf57	Q5W0N0	161 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	SHCBP1	Q8NEM2	672 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	TMEM237	Q96Q45	408 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	KCNK16	Q96T55	309 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	FAM105A	Q9NUU6	356 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	OR12D3	Q9UGF7	316 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	ATP11B	Q9Y2G3	1177 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	SNX10	Q9Y5X0	201 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	SCTR	P47872	440 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	QPCT	Q16769	361 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	C1orf220	Q5T0J3	134 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	ANKRD22	Q5VYY1	191 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	PTAR1	Q7Z6K3	402 aa	Predicted RBP	12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	ZCCHC9	Q8N567	271 aa	Known RBP	12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	PCSK9	Q8NBP7	692 aa	Known RBP	12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	OR52K1	Q8NGK4	314 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	LMO3	Q8TAP4	145 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	NPLOC4	Q8TAT6	608 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	SPOCK2	Q92563	424 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	ART4	Q93070	314 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	BORCS6	Q96GS4	357 aa		12.19	□□□□□ -0.46
DDR1-223	ENST00000324771	TRDMT1	O14717	391 aa	Known RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	ENO3	P13929	434 aa	Predicted RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	BBS12	Q6ZW61	710 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	PACS2	Q86VP3	889 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	XYLT1	Q86Y38	959 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	ALLC	Q8N6M5	410 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	ANKRD52	Q8NB46	1076 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	SCG3	Q8WXD2	468 aa	Known RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	CATSPERB	Q9H7T0	1116 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	NRDE2	Q9H7Z3	1164 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	TOGARAM1	Q9Y4F4	1720 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	UBR2	Q8IWV8	1755 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	FAM155B	O75949	473 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	ALDH2	P05091	517 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	PIRT	P0C851	137 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	TAC1	P20366	129 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	GRM5	P41594	1212 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	PEX5	P50542	639 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	PDCD2	Q16342	344 aa	Predicted RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	RABGAP1L	Q5R372	815 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	CRELD2	Q6UXH1	353 aa	Predicted RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	RGS9BP	Q6ZS82	235 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	IFNE	Q86WN2	208 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	GRAMD1A	Q96CP6	724 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	GCNA	Q96QF7	691 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	EGFL8	Q99944	293 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	WWP1	Q9H0M0	922 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	FZD8	Q9H461	694 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	DONSON	Q9NYP3	566 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	RGS17	Q9UGC6	210 aa	Predicted RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	GRID1	Q9ULK0	1009 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	CCDC88A	Q3V6T2	1871 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	MDM4	O15151	490 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	MSI1	O43347	362 aa	Known RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	KIF1C	O43896	1103 aa	Known RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	VAPB	O95292	243 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	CBX6	O95503	412 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	ERCC2	P18074	760 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	SP100	P23497	879 aa	Predicted RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	RECQL	P46063	649 aa	Predicted RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	PLK1	P53350	603 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	PLIN5	Q00G26	463 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	NAPEPLD	Q6IQ20	393 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	TTC30B	Q8N4P2	665 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	PGM2	Q96G03	612 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	POPDC2	Q9HBU9	364 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	PTPRH	Q9HD43	1115 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	UTP6	Q9NYH9	597 aa	Known RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	GLI3	P10071	1580 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	S100B	P04271	92 aa	Predicted RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	HNRNPH1	P31943	449 aa	Known RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	SCNN1B	P51168	640 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	KPNA2	P52292	529 aa	Known RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	GDF10	P55107	478 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	MAX	P61244	160 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	MRPS6	P82932	125 aa	Known RBP	12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	WNT8B	Q93098	351 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	NUF2	Q9BZD4	464 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	RNF208	Q9H0X6	261 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	ZNF112	Q9UJU3	913 aa		12.18	□□□□□ -0.46
DDR1-223	ENST00000324771	CACNA1S	Q13698	1873 aa		12.17	□□□□□ -0.46
DDR1-223	ENST00000324771	MYBPHL	A2RUH7	354 aa		12.17	□□□□□ -0.46
DDR1-223	ENST00000324771		A8MX80	341 aa		12.17	□□□□□ -0.46
DDR1-223	ENST00000324771	CBX4	O00257	560 aa		12.17	□□□□□ -0.46
DDR1-223	ENST00000324771	PHGDH	O43175	533 aa	Known RBP	12.17	□□□□□ -0.46
DDR1-223	ENST00000324771	CKM	P06732	381 aa		12.17	□□□□□ -0.46
DDR1-223	ENST00000324771	PBX3	P40426	434 aa		12.17	□□□□□ -0.46
DDR1-223	ENST00000324771	CLCNKB	P51801	687 aa		12.17	□□□□□ -0.46
DDR1-223	ENST00000324771	AQP5	P55064	265 aa		12.17	□□□□□ -0.46
DDR1-223	ENST00000324771	ITGA9	Q13797	1035 aa		12.17	□□□□□ -0.46
DDR1-223	ENST00000324771	CCDC142	Q17RM4	750 aa		12.17	□□□□□ -0.46
DDR1-223	ENST00000324771	ACAD11	Q709F0	780 aa		12.17	□□□□□ -0.46

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