RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 GIMAP4Q9NUV9 329 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 KIAA1522Q9P206 1035 aaPredicted RBP13.17□□□□□ -0.3
CCDC149-201ENST00000324309 PACSIN2Q9UNF0 486 aaPredicted RBP13.17□□□□□ -0.3
CCDC149-201ENST00000324309 FRMD3A2A2Y4 597 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 ATMINO43313 823 aaPredicted RBP13.17□□□□□ -0.3
CCDC149-201ENST00000324309 EDNRBP24530 442 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 CDH17Q12864 832 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 ORC1Q13415 861 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 ARSHQ5FYA8 562 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 SCARA3Q6AZY7 606 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 STRADAQ7RTN6 431 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 SLC25A41Q8N5S1 370 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 HEXDCQ8WVB3 486 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 SMG7Q92540 1137 aaKnown RBP13.17□□□□□ -0.3
CCDC149-201ENST00000324309 CLPBQ9H078 707 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 PCDHGB4Q9UN71 923 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 SIK3Q9Y2K2 1263 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 PCDHA3Q9Y5H8 950 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 NCANO14594 1321 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 SYCE1LA8MT33 242 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 B4GALT5O43286 388 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 RHOBTB1O94844 696 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 PMS1P54277 932 aaKnown RBP13.17□□□□□ -0.3
CCDC149-201ENST00000324309 ART3Q13508 389 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 FAM83EQ2M2I3 478 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 AAK1Q2M2I8 961 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 CBWD6Q4V339 395 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 CBWD3Q5JTY5 395 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 CBWD5Q5RIA9 395 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 PLPP4Q5VZY2 271 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 NUDCD3Q8IVD9 361 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 APODP05090 189 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 AGAP9Q5VTM2 703 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 E4F1Q66K89 784 aaPredicted RBP13.17□□□□□ -0.3
CCDC149-201ENST00000324309 PRUNE1Q86TP1 453 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 FAM71DQ8N9W8 422 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 FAR2Q96K12 515 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 LATS2Q9NRM7 1088 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 GTSE1Q9NYZ3 720 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 LNPEPQ9UIQ6 1025 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 ORC6Q9Y5N6 252 aa13.17□□□□□ -0.3
CCDC149-201ENST00000324309 SLURP2P0DP57 97 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCDC149-201ENST00000324309 ZNF670Q9BS34 389 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 ADAMTS5Q9UNA0 930 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 E5RJQ4 531 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 PLEKP08567 350 aaPredicted RBP13.16□□□□□ -0.3
CCDC149-201ENST00000324309 OR1D2P34982 312 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 MAPK7Q13164 816 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 MTF1Q14872 753 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 ARMC12Q5T9G4 340 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 TEDDM1Q5T9Z0 273 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 CDCA2Q69YH5 1023 aaPredicted RBP13.16□□□□□ -0.3
CCDC149-201ENST00000324309 NT5DC3Q86UY8 548 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 PIGZQ86VD9 579 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 EPS8L1Q8TE68 723 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 TEKT4Q8WW24 435 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 TKTL2Q9H0I9 626 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 SHOC2Q9UQ13 582 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 TJP1Q07157 1748 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 DDX60Q8IY21 1712 aaKnown RBP13.16□□□□□ -0.3
CCDC149-201ENST00000324309 ARL5CA6NH57 179 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 NDUFS2O75306 463 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 MATKP42679 507 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 VCPP55072 806 aaKnown RBP13.16□□□□□ -0.3
CCDC149-201ENST00000324309 ZNF662Q6ZS27 426 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 COG1Q8WTW3 980 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 BSNDQ8WZ55 320 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 SGSM3Q96HU1 749 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 RIC8BQ9NVN3 520 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 FAM153AQ9UHL3 310 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 GRID1Q9ULK0 1009 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 PCDHGC3Q9UN70 934 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 TGFB1I1O43294 461 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 MAGEA4P43358 317 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 OTUD4Q01804 1114 aaKnown RBP13.16□□□□□ -0.3
CCDC149-201ENST00000324309 KIF19Q2TAC6 998 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 AGBL2Q5U5Z8 902 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 LRRC39Q96DD0 335 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 TXNRD2Q9NNW7 524 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 RBM22Q9NW64 420 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCDC149-201ENST00000324309 A0A0U1RQF3 1178 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 APOC4-APOC2K7ER74 178 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 ZWINTO95229 277 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 APOC2P02655 101 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 CCND3P30281 292 aaPredicted RBP13.16□□□□□ -0.3
CCDC149-201ENST00000324309 SLCO1A2P46721 670 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 SKP1P63208 163 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 RRP1BQ14684 758 aaKnown RBP13.16□□□□□ -0.3
CCDC149-201ENST00000324309 MORN1Q5T089 497 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 MYO1HQ8N1T3 1032 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 PHC3Q8NDX5 983 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 WFIKKN2Q8TEU8 576 aa13.16□□□□□ -0.3
CCDC149-201ENST00000324309 HNRNPABQ99729 332 aaKnown RBP13.16□□□□□ -0.3
CCDC149-201ENST00000324309 AFF4Q9UHB7 1163 aaKnown RBP13.16□□□□□ -0.3
CCDC149-201ENST00000324309 GOLGA8TH3BQL2 631 aa13.15□□□□□ -0.3
CCDC149-201ENST00000324309 IFRD1O00458 451 aaPredicted RBP13.15□□□□□ -0.3
CCDC149-201ENST00000324309 KPNA5O15131 536 aa13.15□□□□□ -0.3
CCDC149-201ENST00000324309 CLDN11O75508 207 aa13.15□□□□□ -0.3
CCDC149-201ENST00000324309 ATP1A2P50993 1020 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms