RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 TDRPQ86YL5 185 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 NKX2-3Q8TAU0 364 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 PIWIL2Q8TC59 973 aaKnown RBP7.42□□□□□ -1.22
SOX6-201ENST00000316399 SPATA13Q96N96 652 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 PORCNQ9H237 461 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 GOLGA8RI6L899 631 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 ATP9BO43861 1147 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 SLC4A1P02730 911 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 STAG3L1P0CL83 205 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 VCAM1P19320 739 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 NCKAP1LP55160 1127 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 ELF3P78545 371 aaPredicted RBP7.42□□□□□ -1.22
SOX6-201ENST00000316399 AUHQ13825 339 aaKnown RBP7.42□□□□□ -1.22
SOX6-201ENST00000316399 LACTB2Q53H82 288 aaPredicted RBP7.42□□□□□ -1.22
SOX6-201ENST00000316399 TMEM139Q8IV31 216 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.42□□□□□ -1.22
SOX6-201ENST00000316399 TDRD5Q8NAT2 981 aaKnown RBP7.42□□□□□ -1.22
SOX6-201ENST00000316399 ETNPPLQ8TBG4 499 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 MTMR12Q9C0I1 747 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 CCDC90BQ9GZT6 254 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 DYRK4Q9NR20 520 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 TNFSF13BQ9Y275 285 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 DERAQ9Y315 318 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 ASTN1O14525 1302 aa7.42□□□□□ -1.22
SOX6-201ENST00000316399 UBA6A0AVT1 1052 aaPredicted RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 SNAP23O00161 211 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 SNAP91O60641 907 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 SYF2O95926 243 aaKnown RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 SERPINA6P08185 405 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 SNHG28P0DPA3 235 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 DMC1Q14565 340 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 FAM98BQ52LJ0 330 aaKnown RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 PHC3Q8NDX5 983 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 ZNF606Q8WXB4 792 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 SH3KBP1Q96B97 665 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 ZNF446Q9NWS9 450 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 C6orf203Q9P0P8 240 aaPredicted RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 KANSL3Q9P2N6 904 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 ATF5Q9Y2D1 282 aaPredicted RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 ATP11BQ9Y2G3 1177 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 PTCH2Q9Y6C5 1203 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 GSNP06396 782 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 NCAM1P13591 858 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 EPHB2P29323 1055 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 SLC12A3P55017 1021 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 MAMLD1Q13495 774 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 SQLEQ14534 574 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 RP9Q8TA86 221 aaKnown RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 SLCO2A1Q92959 643 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 DNAJC19Q96DA6 116 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 UROC1Q96N76 676 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 C17orf80Q9BSJ5 609 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 MRPL9Q9BYD2 267 aaKnown RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 ELOVL4Q9GZR5 314 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 SIK2Q9H0K1 926 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 AAASQ9NRG9 546 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 KLHL11Q9NVR0 708 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 DPP7Q9UHL4 492 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 ZMYND8Q9ULU4 1186 aaPredicted RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 PRPF4O43172 522 aaKnown RBP eCLIP7.41□□□□□ -1.22
SOX6-201ENST00000316399 VCLP18206 1134 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 CYP2F1P24903 491 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 FASP25445 335 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 RPL3P39023 403 aaKnown RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 TTMPQ5BVD1 217 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 INTS6LQ5JSJ4 861 aaKnown RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 ZNF280DQ6N043 979 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 MDM1Q8TC05 714 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 MYLK2Q9H1R3 596 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 FAM49BQ9NUQ9 324 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 HACL1Q9UJ83 578 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 PRPF19Q9UMS4 504 aaKnown RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 COL1A2P08123 1366 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 ITGB3P05106 788 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 RRM2P31350 389 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 DSG3P32926 999 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 ELK3P41970 407 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 CLK1P49759 484 aaKnown RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 CDK18Q07002 472 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 N4BP2L1Q5TBK1 243 aaPredicted RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 DENND5BQ6ZUT9 1274 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 CHSY1Q86X52 802 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 IQCKQ8N0W5 287 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 ZNF483Q8TF39 744 aaPredicted RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 LENG9Q96B70 501 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 DNAJC18Q9H819 358 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 COMMD8Q9NX08 183 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 STMN3Q9NZ72 180 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 BTBD7Q9P203 1132 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 FAM153AQ9UHL3 310 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 F5H5T6 163 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 MOCS2O96007 188 aaPredicted RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 PIK3R1P27986 724 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 WDR59Q6PJI9 974 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 LRRC74BQ6ZQY2 392 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 IPMKQ8NFU5 416 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 ZCCHC2Q9C0B9 1178 aaKnown RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 USE1Q9NZ43 259 aa7.41□□□□□ -1.22
SOX6-201ENST00000316399 UBA2Q9UBT2 640 aaPredicted RBP7.41□□□□□ -1.22
SOX6-201ENST00000316399 SPDYE5A6NIY4 337 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms