RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 CPT1BQ92523 772 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 CD101Q93033 1021 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 ZNF670Q9BS34 389 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 ARHGEF38Q9NXL2 777 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 UBA6A0AVT1 1052 aaPredicted RBP13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 BNIP3LO60238 219 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 DNAJC8O75937 253 aaPredicted RBP13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 USP17L7P0C7H9 530 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 GOT1P17174 413 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 MLH1P40692 756 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 NOMO1Q15155 1222 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 DNAL1Q4LDG9 190 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 ANKRD22Q5VYY1 191 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 DCP1BQ8IZD4 617 aaKnown RBP13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 SEPT5Q99719 369 aaPredicted RBP13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 NUF2Q9BZD4 464 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 POPDC2Q9HBU9 364 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 VANGL2Q9ULK5 521 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 MRPL42Q9Y6G3 142 aaKnown RBP13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 STYXL1Q9Y6J8 313 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 NPR3P17342 541 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 CASP2P42575 452 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 NUMBP49757 651 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 MAP3K10Q02779 954 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 PDK4Q16654 411 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 RNASEH2BQ5TBB1 312 aaKnown RBP13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 RASIP1Q5U651 963 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 PMF1Q6P1K2 205 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 PCYT2Q99447 389 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 TRIM4Q9C037 500 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 TSPYL2Q9H2G4 693 aaPredicted RBP13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 TCRBV9S1A1TA0A576 114 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 H0YGN5 161 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 CLDN5O00501 218 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 NOS2P35228 1153 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 KIF19Q2TAC6 998 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 MGAT5BQ3V5L5 792 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 WNT8BQ93098 351 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 SGF29Q96ES7 293 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 IARS2Q9NSE4 1012 aaKnown RBP13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 IRAK4Q9NWZ3 460 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 DCDC2Q9UHG0 476 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 NFS1Q9Y697 457 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 COL1A2P08123 1366 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 GOLGA8CPA6NN73 597 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 ATG7O95352 703 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 AKR1A1P14550 325 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 TPH1P17752 444 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 CNTFP26441 200 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 SLC12A1Q13621 1099 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 RASA2Q15283 850 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 LINC00523Q86TU6 105 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 RMDN1Q96DB5 314 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 LRRC39Q96DD0 335 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 ZBED3Q96IU2 234 aaPredicted RBP13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 DNAJC16Q9Y2G8 782 aa13.81□□□□□ -0.2
PCDHB9-201ENST00000316105 ANXA9O76027 345 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 ANKRD20A2Q5SQ80 823 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 ANKRD20A1Q5TYW2 823 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 C9orf57Q5W0N0 161 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 CXCL17Q6UXB2 119 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 MIB1Q86YT6 1006 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 RAET1EQ8TD07 263 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 SPDL1Q96EA4 605 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 TWNKQ96RR1 684 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 LGMNQ99538 433 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 EIF2AQ9BY44 585 aaKnown RBP13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 ECM29Q5VYK3 1845 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 A0A0A0MRY4 1105 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 SLC15A5A6NIM6 579 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 KLHL2O95198 593 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 LTFP02788 710 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 ALADP13716 330 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 ETFBP38117 255 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 N4BP2L1Q5TBK1 243 aaPredicted RBP13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 ZCCHC23Q6ZST2 131 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 SLCO2A1Q92959 643 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 SPATA13Q96N96 652 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 MTG1Q9BT17 334 aaPredicted RBP13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 STARD13Q9Y3M8 1113 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 CDY2AQ9Y6F7 541 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 CDY1Q9Y6F8 540 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 LTBP3Q9NS15 1303 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 TRDMT1O14717 391 aaKnown RBP13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 S100BP04271 92 aaPredicted RBP13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 DARSP14868 501 aaKnown RBP13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 SERPINB3P29508 390 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 SCNN1GP51170 649 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 FCGRTP55899 365 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 ARHGEF6Q15052 776 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 OVOS1Q6IE37 1185 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 ILDR2Q71H61 639 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 SMARCD1Q96GM5 515 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 OSBPL1AQ9BXW6 950 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 YIPF3Q9GZM5 350 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 ANGPTL3Q9Y5C1 460 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 HACD1B0YJ81 288 aa13.8□□□□□ -0.2
PCDHB9-201ENST00000316105 TOMM70O94826 608 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms