RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TRIT1Q9H3H1 467 aaKnown RBP15.87■□□□□ 0.13
HCFC1-201ENST00000310441 METTL5Q9NRN9 209 aaKnown RBP15.87■□□□□ 0.13
HCFC1-201ENST00000310441 LDLRP01130 860 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 MMP10P09238 476 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 SSTR3P32745 418 aaPredicted RBP15.87■□□□□ 0.13
HCFC1-201ENST00000310441 RPL3P39023 403 aaKnown RBP15.87■□□□□ 0.13
HCFC1-201ENST00000310441 ZSWIM7Q19AV6 140 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 ZNF614Q8N883 585 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 TRPC4APQ8TEL6 797 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 NARFQ9UHQ1 456 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 PTPN3P26045 913 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 SLC26A11Q86WA9 606 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 HEATR4Q86WZ0 1026 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 SLC13A5Q86YT5 568 aaPredicted RBP15.87■□□□□ 0.13
HCFC1-201ENST00000310441 TMPRSS6Q8IU80 811 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 SPATA5L1Q9BVQ7 753 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 TMEM106CQ9BVX2 250 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 FBXO28Q9NVF7 368 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 USP18Q9UMW8 372 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 ACOT9Q9Y305 439 aa15.87■□□□□ 0.13
HCFC1-201ENST00000310441 H3BN98 237 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 RECQL5O94762 991 aaPredicted RBP15.86■□□□□ 0.13
HCFC1-201ENST00000310441 LBPP18428 481 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 CASP4P49662 377 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 ING4Q9UNL4 249 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 C1orf232A0A0U1RR37 186 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 PDPK2PQ6A1A2 396 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 MTSS1LQ765P7 747 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 ITIH5Q86UX2 942 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 FAM228AQ86W67 206 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 ZNF655Q8N720 491 aaPredicted RBP15.86■□□□□ 0.13
HCFC1-201ENST00000310441 RPRD1AQ96P16 312 aaPredicted RBP15.86■□□□□ 0.13
HCFC1-201ENST00000310441 TMEM216Q9P0N5 145 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 RPL10AP62906 217 aaKnown RBP15.86■□□□□ 0.13
HCFC1-201ENST00000310441 GRTP1Q5TC63 336 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 ZNF557Q8N988 423 aaPredicted RBP15.86■□□□□ 0.13
HCFC1-201ENST00000310441 UBE2E3Q969T4 207 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 CLCC1Q96S66 551 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 SLC39A8Q9C0K1 460 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 LRRC14BA6NHZ5 514 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 ATP9AO75110 1047 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 HLA-DRAP01903 254 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 TBCELQ5QJ74 424 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 ZNF671Q8TAW3 534 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 QRFPRQ96P65 431 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 TBX20Q9UMR3 447 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 TDP2O95551 362 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 ENO2P09104 434 aaPredicted RBP15.86■□□□□ 0.13
HCFC1-201ENST00000310441 DNAJB2P25686 324 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 GPR1P46091 355 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 AQP5P55064 265 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 RAB25P57735 213 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 AMER2Q8N7J2 671 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 SETBP1Q9Y6X0 1596 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 BTN3A3O00478 584 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 SKAP2O75563 359 aaPredicted RBP15.86■□□□□ 0.13
HCFC1-201ENST00000310441 LARGE1O95461 756 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 HIST1H2ABP04908 130 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 XRCC4Q13426 336 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 SMCO1Q147U7 214 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 NR6A1Q15406 480 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 IZUMO2Q6UXV1 221 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 HIST3H2AQ7L7L0 130 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 ARHGAP22Q7Z5H3 698 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 HIST1H2ACQ93077 130 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 COLEC11Q9BWP8 271 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 NUAK2Q9H093 628 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 TUBA8Q9NY65 449 aaPredicted RBP15.86■□□□□ 0.13
HCFC1-201ENST00000310441 TEX46H3BTG2 121 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 H7C1W4 665 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 RPL19P84098 196 aaKnown RBP15.86■□□□□ 0.13
HCFC1-201ENST00000310441 PRKCEQ02156 737 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 TAF13Q15543 124 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 INTS11Q5TA45 600 aaKnown RBP15.86■□□□□ 0.13
HCFC1-201ENST00000310441 OXER1Q8TDS5 423 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 CPNE1Q99829 537 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 TRPC4Q9UBN4 977 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 ZNF232Q9UNY5 417 aa15.86■□□□□ 0.13
HCFC1-201ENST00000310441 TPST1O60507 370 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 ITGADQ13349 1161 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 PI16Q6UXB8 463 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 BNIPLQ7Z465 357 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 DHFR2Q86XF0 187 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 FNIP1Q8TF40 1166 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 DSN1Q9H410 356 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 SENP2Q9HC62 589 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 SHOC2Q9UQ13 582 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 PRMT3O60678 531 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 IRF1P10914 325 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 CASP1P29466 404 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 DMPKQ09013 629 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 SPP2Q13103 211 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 ZDHHC17Q8IUH5 632 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 SYTL1Q8IYJ3 562 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 CHPFQ8IZ52 775 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 UXS1Q8NBZ7 420 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 GPRASP2Q96D09 838 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 ZCWPW1Q9H0M4 648 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 RPS6KA6Q9UK32 745 aa15.85■□□□□ 0.13
HCFC1-201ENST00000310441 BAIAP3O94812 1187 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms