RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TM9SF1O15321 606 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 MFSD11O43934 449 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 USP12O75317 370 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 F7P08709 466 aaPredicted RBP11.94□□□□□ -0.5
PTPN2-201ENST00000309660 SNRPAP09012 282 aaKnown RBP11.94□□□□□ -0.5
PTPN2-201ENST00000309660 C6orf222P0C671 652 aaPredicted RBP11.94□□□□□ -0.5
PTPN2-201ENST00000309660 TMPRSS15P98073 1019 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 OLIG2Q13516 323 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 TTC39BQ5VTQ0 682 aaPredicted RBP11.94□□□□□ -0.5
PTPN2-201ENST00000309660 HFE2Q6ZVN8 426 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 NDUFAF2Q8N183 169 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 SLC7A14Q8TBB6 771 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 TFB1MQ8WVM0 346 aaKnown RBP11.94□□□□□ -0.5
PTPN2-201ENST00000309660 C10orf82Q8WW14 230 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 DHRS4Q9BTZ2 278 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 ZNF395Q9H8N7 513 aaPredicted RBP11.94□□□□□ -0.5
PTPN2-201ENST00000309660 CNTN3Q9P232 1028 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 I3L4J1 428 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 APOEP02649 317 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 SERPINB4P48594 390 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 PPP2R5DQ14738 602 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 DPYSL2Q16555 572 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 FAM110CQ1W6H9 321 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 SV2CQ496J9 727 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 LGSNQ5TDP6 509 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 ZNF467Q7Z7K2 595 aaPredicted RBP11.94□□□□□ -0.5
PTPN2-201ENST00000309660 C2orf69Q8N8R5 385 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 PPP1R14CQ8TAE6 165 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 KCNV2Q8TDN2 545 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 HTR3CQ8WXA8 447 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 UPF1Q92900 1129 aaKnown RBP eCLIP11.94□□□□□ -0.5
PTPN2-201ENST00000309660 KRT82Q9NSB4 513 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 MTMR10Q9NXD2 777 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 MORF4L1Q9UBU8 362 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 DOCK3Q8IZD9 2030 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 SMIM35A0A1B0GVV1 85 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 CCDC78A2IDD5 438 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 H0Y3Z8 333 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 PIRO00625 290 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 SLC8A1P32418 973 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 MLH1P40692 756 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 TKTL1P51854 596 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 ARFIP2P53365 341 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 DEUP1Q05D60 604 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 ACCSLQ4AC99 568 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 ANKRD20A3Q5VUR7 823 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 ARHGAP17Q68EM7 881 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 NCBP2-AS2Q69YL0 99 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 ZCCHC23Q6ZST2 131 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 ZDHHC17Q8IUH5 632 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 COLGALT1Q8NBJ5 622 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 PGBD4Q96DM1 585 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 DERAQ9Y315 318 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 RNF103O00237 685 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 VAV1P15498 845 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 EPHB2P29323 1055 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 SERPINB3P29508 390 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 PTPN9P43378 593 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 EFHC1Q5JVL4 640 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 ANKRD20A2Q5SQ80 823 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 ANKRD20A1Q5TYW2 823 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 PID1Q7Z2X4 250 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 ANKRD23Q86SG2 305 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 HASPINQ8TF76 798 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 EDEM1Q92611 657 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 KCNK16Q96T55 309 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 GAD1Q99259 594 aa11.93□□□□□ -0.5
PTPN2-201ENST00000309660 DDX43Q9NXZ2 648 aaKnown RBP11.93□□□□□ -0.5
PTPN2-201ENST00000309660 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.92□□□□□ -0.5
PTPN2-201ENST00000309660 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 CASTOR2A6NHX0 329 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 SPAG6O75602 509 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 MATKP42679 507 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 ERFP50548 548 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 RNF139Q8WU17 664 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 VPS11Q9H270 941 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 ARHGEF4Q9NR80 690 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 ARHGEF3Q9NR81 526 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 ARMCX1Q9P291 453 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 FAM237BA0A1B0GVD1 139 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 KRT38O76015 456 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 ZFXP17010 805 aaPredicted RBP11.92□□□□□ -0.5
PTPN2-201ENST00000309660 PTPN1P18031 435 aaKnown RBP11.92□□□□□ -0.5
PTPN2-201ENST00000309660 MGAT1P26572 445 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 PSMB4P28070 264 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 ACADSBP45954 432 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 CPA2P48052 419 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 SLC18A1P54219 525 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 RASA2Q15283 850 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 TAF1CQ15572 869 aaPredicted RBP11.92□□□□□ -0.5
PTPN2-201ENST00000309660 CHI3L2Q15782 390 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 SPRYD7Q5W111 196 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 CRYBG2Q8N1P7 616 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 GIMAP7Q8NHV1 300 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 STK32AQ8WU08 396 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 PRR11Q96HE9 360 aaPredicted RBP11.92□□□□□ -0.5
PTPN2-201ENST00000309660 TMEM120AQ9BXJ8 343 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 ULBP1Q9BZM6 244 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 PRDM12Q9H4Q4 367 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms