RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 CDT1Q9H211 546 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 BCL9LQ86UU0 1499 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 E5RJQ4 531 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 MAGEA4P43358 317 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 CLCN6P51797 869 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 XRCC4Q13426 336 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 POU6F1Q14863 301 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 PKNOX2Q96KN3 472 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 TNNI3P19429 210 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 ARFIP2P53365 341 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 SNRPD1P62314 119 aaKnown RBP11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 ARMC12Q5T9G4 340 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 BRI3BPQ8WY22 251 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 SCLYQ96I15 445 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 ECT2Q9H8V3 914 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 ALDH18A1P54886 795 aaKnown RBP11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 CDC16Q13042 620 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 PIP4K2CQ8TBX8 421 aa11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 DRG1Q9Y295 367 aaKnown RBP11.01□□□□□ -0.65
SYNPO2-201ENST00000307142 TARSL2A2RTX5 802 aaKnown RBP11□□□□□ -0.65
SYNPO2-201ENST00000307142 SERPINA4P29622 427 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 RTP1P59025 263 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 PPP2R2AP63151 447 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 ING5Q8WYH8 240 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 XAB2Q9HCS7 855 aaKnown RBP11□□□□□ -0.65
SYNPO2-201ENST00000307142 TMEM161AQ9NX61 479 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 CACNA2D2Q9NY47 1150 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 PNMA8BQ9ULN7 279 aaPredicted RBP11□□□□□ -0.65
SYNPO2-201ENST00000307142 SDR42E2A6NKP2 422 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 PTPN3P26045 913 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 BRCC3P46736 316 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 PSEN1P49768 467 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 PSRC1Q6PGN9 363 aaPredicted RBP11□□□□□ -0.65
SYNPO2-201ENST00000307142 RASAL3Q86YV0 1011 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 C17orf80Q9BSJ5 609 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 C2orf49Q9BVC5 232 aaPredicted RBP11□□□□□ -0.65
SYNPO2-201ENST00000307142 STK39Q9UEW8 545 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 ZNHIT2Q9UHR6 403 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 CNTNAP1P78357 1384 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 ATP8B1O43520 1251 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 SPAG6O75602 509 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 LMNAP02545 664 aaKnown RBP11□□□□□ -0.65
SYNPO2-201ENST00000307142 APODP05090 189 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 AMD1P17707 334 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 PLA2G4AP47712 749 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 CLNS1AP54105 237 aaKnown RBP11□□□□□ -0.65
SYNPO2-201ENST00000307142 GABPB1Q06547 395 aaPredicted RBP11□□□□□ -0.65
SYNPO2-201ENST00000307142 TGM3Q08188 693 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 CBWD3Q5JTY5 395 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 CBWD5Q5RIA9 395 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 KRT80Q6KB66 452 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 RSPH1Q8WYR4 309 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 TMEM159Q96B96 161 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 SOHLH2Q9NX45 425 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 SHPRHQ149N8 1683 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 O00370 1275 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 AMPD1P23109 780 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 C1QBPQ07021 282 aaKnown RBP11□□□□□ -0.65
SYNPO2-201ENST00000307142 BOP1Q14137 746 aaKnown RBP11□□□□□ -0.65
SYNPO2-201ENST00000307142 ZNF268Q14587 947 aaPredicted RBP11□□□□□ -0.65
SYNPO2-201ENST00000307142 ATG4AQ8WYN0 398 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 ANLNQ9NQW6 1124 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 SUFUQ9UMX1 484 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 CDYLQ9Y232 598 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 GUCA1CO95843 209 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 INSCQ1MX18 579 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 TSHZ1Q6ZSZ6 1077 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 MTSS1LQ765P7 747 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 TRAPPC5Q8IUR0 188 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 TMEM121Q9BTD3 319 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 SRRDQ9UH36 339 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 FAM32AQ9Y421 112 aaKnown RBP11□□□□□ -0.65
SYNPO2-201ENST00000307142 C11orf97A0A1B0GVM6 126 aaPredicted RBP11□□□□□ -0.65
SYNPO2-201ENST00000307142 VMP1Q96GC9 406 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 MTMR9Q96QG7 549 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 PRPF18Q99633 342 aaKnown RBP11□□□□□ -0.65
SYNPO2-201ENST00000307142 ZSWIM1Q9BR11 485 aa11□□□□□ -0.65
SYNPO2-201ENST00000307142 A0A087X0T9 212 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 SNRPAP09012 282 aaKnown RBP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 FAM228BP0C875 321 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 PYGBP11216 843 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 HPGDP15428 266 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 ITGB5P18084 799 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 ARF4P18085 180 aaPredicted RBP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 KRT20P35900 424 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 CENPPQ6IPU0 288 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 MARK2Q7KZI7 788 aaKnown RBP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 PATL1Q86TB9 770 aaKnown RBP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 JAMLQ86YT9 394 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 IRX2Q9BZI1 471 aaPredicted RBP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 LRRC40Q9H9A6 602 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 CHCHD3Q9NX63 227 aaKnown RBP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 CDY1Q9Y6F8 540 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 DNTTP04053 509 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 MLNP12872 115 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 PAX3P23760 479 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 CYP2C18P33260 490 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 GPC1P35052 558 aa10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 CHI3L1P36222 383 aaPredicted RBP10.99□□□□□ -0.65
SYNPO2-201ENST00000307142 PKN2Q16513 984 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms