RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 CRABP2P29373 138 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 HTR3CQ8WXA8 447 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 SPATA17Q96L03 361 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 CHADO15335 359 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 LIASO43766 372 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 MAPK1P28482 360 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 ILF2Q12905 390 aaKnown RBP13.18□□□□□ -0.3
COL3A1-201ENST00000304636 SNX17Q15036 470 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 LRRC38Q5VT99 294 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 RASGEF1CQ8N431 466 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 DHRSXQ8N5I4 330 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 NDUFAF1Q9Y375 327 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 ZMYM2Q9UBW7 1377 aa13.18□□□□□ -0.3
COL3A1-201ENST00000304636 C2orf81A6NN90 581 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 PDZK1P1A8MUH7 402 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 HMBSP08397 361 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 ZSCAN5DPP0CG00 497 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 EIF4BP23588 611 aaKnown RBP13.17□□□□□ -0.3
COL3A1-201ENST00000304636 AKT1P31749 480 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 GCLCP48506 637 aaPredicted RBP13.17□□□□□ -0.3
COL3A1-201ENST00000304636 TRAF2Q12933 501 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 VEPH1Q14D04 833 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 NFIL3Q16649 462 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 CYP51A1Q16850 503 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 TTC27Q6P3X3 843 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 PLEKHM3Q6ZWE6 761 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 ALLCQ8N6M5 410 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 GLIS3Q8NEA6 775 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 NSMCE2Q96MF7 247 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 SLC25A23Q9BV35 468 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 ZMYND8Q9ULU4 1186 aaPredicted RBP13.17□□□□□ -0.3
COL3A1-201ENST00000304636 RNF225M0QZC1 329 aaPredicted RBP13.17□□□□□ -0.3
COL3A1-201ENST00000304636 CHKAP35790 457 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 NR1H2P55055 460 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 MRPS22P82650 360 aaKnown RBP13.17□□□□□ -0.3
COL3A1-201ENST00000304636 NEDD8Q15843 81 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 AAGABQ6PD74 315 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 KCNMB4Q86W47 210 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 FAM131BQ86XD5 332 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 SVOPQ8N4V2 548 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 RAB42Q8N4Z0 105 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 BHLHE22Q8NFJ8 381 aaPredicted RBP13.17□□□□□ -0.3
COL3A1-201ENST00000304636 BLOC1S5Q8TDH9 187 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 DNAJC19Q96DA6 116 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 APOL2Q9BQE5 337 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 GPR63Q9BZJ6 419 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 STX7O15400 261 aaKnown RBP13.17□□□□□ -0.3
COL3A1-201ENST00000304636 ASNA1O43681 348 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 BAIAP3O94812 1187 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 SLC25A27O95847 323 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 MGAT1P26572 445 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 TPP2P29144 1249 aaPredicted RBP13.17□□□□□ -0.3
COL3A1-201ENST00000304636 CD151P48509 253 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 NPY2RP49146 381 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 RAB14P61106 215 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 CDH17Q12864 832 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 IRF2BP2Q7Z5L9 587 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 ZDHHC17Q8IUH5 632 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 DCP1BQ8IZD4 617 aaKnown RBP13.17□□□□□ -0.3
COL3A1-201ENST00000304636 RNF148Q8N7C7 305 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 ACER1Q8TDN7 264 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 RSPH1Q8WYR4 309 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 SLITRK1Q96PX8 696 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 FICDQ9BVA6 458 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 HACD1B0YJ81 288 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 FBXO21O94952 628 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 VIL1P09327 827 aaKnown RBP13.17□□□□□ -0.3
COL3A1-201ENST00000304636 PPP3CCP48454 512 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 XIAPP98170 497 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 IL5RAQ01344 420 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 PPATQ06203 517 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 TWF1Q12792 350 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 ZSWIM2Q8NEG5 633 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 ZDHHC15Q96MV8 337 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 TMX2Q9Y320 296 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 CNOT3O75175 753 aaKnown RBP13.17□□□□□ -0.3
COL3A1-201ENST00000304636 ARIH2O95376 493 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 STAG3L1P0CL83 205 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 PLIN5Q00G26 463 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 TTLL9Q3SXZ7 439 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 ARCQ7LC44 396 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 GORASP1Q9BQQ3 440 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 C1orf50Q9BV19 199 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 ZCWPW1Q9H0M4 648 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 MUC3BQ9H195 1237 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 STN1Q9H668 368 aaKnown RBP13.17□□□□□ -0.3
COL3A1-201ENST00000304636 NMRAL1Q9HBL8 299 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 CYLDQ9NQC7 956 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 SFMBT1Q9UHJ3 866 aa13.17□□□□□ -0.3
COL3A1-201ENST00000304636 EDF1O60869 148 aaKnown RBP13.16□□□□□ -0.3
COL3A1-201ENST00000304636 JCHAINP01591 159 aa13.16□□□□□ -0.3
COL3A1-201ENST00000304636 RPL14P50914 215 aaKnown RBP13.16□□□□□ -0.3
COL3A1-201ENST00000304636 SLC25A3Q00325 362 aa13.16□□□□□ -0.3
COL3A1-201ENST00000304636 TP53BP2Q13625 1128 aa13.16□□□□□ -0.3
COL3A1-201ENST00000304636 PHF21AQ96BD5 680 aa13.16□□□□□ -0.3
COL3A1-201ENST00000304636 MTERF3Q96E29 417 aa13.16□□□□□ -0.3
COL3A1-201ENST00000304636 WDR41Q9HAD4 459 aa13.16□□□□□ -0.3
COL3A1-201ENST00000304636 POLG2Q9UHN1 485 aa13.16□□□□□ -0.3
COL3A1-201ENST00000304636 FSCN2O14926 492 aa13.16□□□□□ -0.3
COL3A1-201ENST00000304636 INPP4BO15327 924 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms