RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 PPIL6Q8IXY8 311 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 LRRC43Q8N309 656 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 GLIS1Q8NBF1 620 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 FAM76AQ8TAV0 307 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 MYLIPQ8WY64 445 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 ARL8AQ96BM9 186 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 ATP6V1G3Q96LB4 118 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 RHOBTB2Q9BYZ6 727 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 ROPN1BQ9BZX4 212 aaPredicted RBP12.45□□□□□ -0.42
TPM3-202ENST00000302206 SEMA4AQ9H3S1 761 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 FAM204AQ9H8W3 233 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 ROPN1Q9HAT0 212 aaPredicted RBP12.45□□□□□ -0.42
TPM3-202ENST00000302206 WDR6Q9NNW5 1121 aaKnown RBP12.45□□□□□ -0.42
TPM3-202ENST00000302206 COMMD8Q9NX08 183 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 MARCH5Q9NX47 278 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 CWC15Q9P013 229 aaKnown RBP12.45□□□□□ -0.42
TPM3-202ENST00000302206 CALCOCO1Q9P1Z2 691 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 SAE1Q9UBE0 346 aaPredicted RBP12.45□□□□□ -0.42
TPM3-202ENST00000302206 FBXW11Q9UKB1 542 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 TBX21Q9UL17 535 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 PRG3Q9Y2Y8 225 aaPredicted RBP12.45□□□□□ -0.42
TPM3-202ENST00000302206 FARP1Q9Y4F1 1045 aaPredicted RBP12.45□□□□□ -0.42
TPM3-202ENST00000302206 PCDHB5Q9Y5E4 795 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 RAD54BQ9Y620 910 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 A6NNZ2 444 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 H7C0C1 242 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 TNFRSF10AO00220 468 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 EIF3HO15372 352 aaKnown RBP eCLIP12.44□□□□□ -0.42
TPM3-202ENST00000302206 IGLV3-25P01717 112 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 GALTP07902 379 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 ETS1P14921 441 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 CYP2C18P33260 490 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 RPL22P35268 128 aaKnown RBP12.44□□□□□ -0.42
TPM3-202ENST00000302206 CHKAP35790 457 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 GRIK1P39086 918 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 ATP5OP48047 213 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 SLC11A1P49279 550 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 VPS41P49754 854 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 ATN1P54259 1190 aaPredicted RBP12.44□□□□□ -0.42
TPM3-202ENST00000302206 IFFO1Q0D2I5 559 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 SEMA3BQ13214 749 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 KCTD19Q17RG1 926 aaPredicted RBP12.44□□□□□ -0.42
TPM3-202ENST00000302206 ARL13BQ3SXY8 428 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 TUBB8Q3ZCM7 444 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 TRIM60Q495X7 471 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 SLC39A12Q504Y0 691 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 PPP6R3Q5H9R7 873 aaPredicted RBP12.44□□□□□ -0.42
TPM3-202ENST00000302206 BSPRYQ5W0U4 402 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 CNKSR3Q6P9H4 555 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 C1orf228Q6PIY5 440 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 NPNTQ6UXI9 565 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 UNC45BQ8IWX7 931 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 SLC7A14Q8TBB6 771 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 C2orf15Q8WU43 125 aaKnown RBP12.44□□□□□ -0.42
TPM3-202ENST00000302206 CDC42EP4Q9H3Q1 356 aaKnown RBP12.44□□□□□ -0.42
TPM3-202ENST00000302206 USP29Q9HBJ7 922 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 ABCC13Q9NSE7 274 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 PIGVQ9NUD9 493 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 PAK5Q9P286 719 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 MUC3AQ02505 3323 aa12.44□□□□□ -0.42
TPM3-202ENST00000302206 CARNS1A5YM72 827 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 TBC1D4O60343 1298 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 TCEA3O75764 348 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 DGKIO75912 1065 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 TTC4O95801 387 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 EFEMP2O95967 443 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 IFNB1P01574 187 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 ABHD2P08910 425 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 ZSCAN5DPP0CG00 497 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 NCAM1P13591 858 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 HTR7P34969 479 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 GATMP50440 423 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 SLC5A3P53794 718 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 GDF10P55107 478 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 PITX1P78337 314 aaPredicted RBP12.43□□□□□ -0.42
TPM3-202ENST00000302206 SKOR1P84550 965 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 EIF4EBP2Q13542 120 aaPredicted RBP12.43□□□□□ -0.42
TPM3-202ENST00000302206 IKBKEQ14164 716 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 SLC29A2Q14542 456 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 PAFAH1B3Q15102 231 aaKnown RBP12.43□□□□□ -0.42
TPM3-202ENST00000302206 CTXN3Q4LDR2 81 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 SLC45A4Q5BKX6 768 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 TJAP1Q5JTD0 557 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 C6orf118Q5T5N4 469 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 FAM171A1Q5VUB5 890 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 FUT10Q6P4F1 479 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 CCDC25Q86WR0 208 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 ARHGAP18Q8N392 663 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 NAT8LQ8N9F0 302 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 FAM71DQ8N9W8 422 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 RNF139Q8WU17 664 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 PRCCQ92733 491 aaPredicted RBP12.43□□□□□ -0.42
TPM3-202ENST00000302206 PGM2Q96G03 612 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 SCLYQ96I15 445 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 CEP295NLQ96MC4 621 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 TTC25Q96NG3 672 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 OLFM3Q96PB7 478 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 QKIQ96PU8 341 aaKnown RBP eCLIP12.43□□□□□ -0.428e-8■■■■■ 32.5
TPM3-202ENST00000302206 FRMD8Q9BZ67 464 aaPredicted RBP12.43□□□□□ -0.42
TPM3-202ENST00000302206 FBXO44Q9H4M3 255 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms