RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TBX21Q9UL17 535 aa23.1■■□□□ 1.29
SMAD1-201ENST00000302085 CFAP69A5D8W1 941 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 FAM72CH0Y354 149 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 MAGEA4P43358 317 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 GPR15P49685 360 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 YWHAGP61981 247 aaKnown RBP eCLIP23.09■■□□□ 1.29
SMAD1-201ENST00000302085 GAD2Q05329 585 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 IFRD2Q12894 506 aaPredicted RBP23.09■■□□□ 1.29
SMAD1-201ENST00000302085 FAM72AQ5TYM5 149 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 SDHAF4Q5VUM1 108 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 FAM72DQ6L9T8 149 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 FUT10Q6P4F1 479 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 SCD5Q86SK9 330 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 TMEM173Q86WV6 379 aaPredicted RBP23.09■■□□□ 1.29
SMAD1-201ENST00000302085 FAM72BQ86X60 149 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 DQX1Q8TE96 717 aaKnown RBP23.09■■□□□ 1.29
SMAD1-201ENST00000302085 BCL7CQ8WUZ0 217 aaPredicted RBP23.09■■□□□ 1.29
SMAD1-201ENST00000302085 ZNF333Q96JL9 665 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 PRDM16Q9HAZ2 1276 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 DTLQ9NZJ0 730 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.09■■□□□ 1.29
SMAD1-201ENST00000302085 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.09■■□□□ 1.29
SMAD1-201ENST00000302085 OR6C75A6NL08 312 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 CREB3O43889 395 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 DDR2Q16832 855 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 DNAJC21Q5F1R6 531 aaKnown RBP23.09■■□□□ 1.29
SMAD1-201ENST00000302085 CEP128Q6ZU80 1094 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 TAS1R1Q7RTX1 841 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 CCDC33Q8N5R6 958 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 C8orf48Q96LL4 319 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 C9orf72Q96LT7 481 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 PGLYRP2Q96PD5 576 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 SAYSD1Q9NPB0 183 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 ATP11BQ9Y2G3 1177 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 PCDHB5Q9Y5E4 795 aa23.09■■□□□ 1.29
SMAD1-201ENST00000302085 SF3B1O75533 1304 aaKnown RBP eCLIP23.08■■□□□ 1.29
SMAD1-201ENST00000302085 TCRBV7S3A2A0A539 114 aa23.08■■□□□ 1.29
SMAD1-201ENST00000302085 GOLGA8MH3BSY2 632 aa23.08■■□□□ 1.29
SMAD1-201ENST00000302085 SEMA3BQ13214 749 aa23.08■■□□□ 1.29
SMAD1-201ENST00000302085 DPYSQ14117 519 aa23.08■■□□□ 1.29
SMAD1-201ENST00000302085 ZNF280DQ6N043 979 aa23.08■■□□□ 1.29
SMAD1-201ENST00000302085 KCNT2Q6UVM3 1135 aa23.08■■□□□ 1.29
SMAD1-201ENST00000302085 VSTM1Q6UX27 236 aa23.08■■□□□ 1.29
SMAD1-201ENST00000302085 RSPO2Q6UXX9 243 aaPredicted RBP23.08■■□□□ 1.29
SMAD1-201ENST00000302085 HOOK3Q86VS8 718 aa23.08■■□□□ 1.29
SMAD1-201ENST00000302085 CDKL3Q8IVW4 592 aaPredicted RBP23.08■■□□□ 1.29
SMAD1-201ENST00000302085 ATAD1Q8NBU5 361 aa23.08■■□□□ 1.29
SMAD1-201ENST00000302085 WDCPQ9H6R7 721 aa23.08■■□□□ 1.29
SMAD1-201ENST00000302085 FNDC1Q4ZHG4 1894 aaPredicted RBP23.07■■□□□ 1.28
SMAD1-201ENST00000302085 TLDC2A0PJX2 215 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 EEF2KO00418 725 aaKnown RBP23.07■■□□□ 1.28
SMAD1-201ENST00000302085 DGKIO75912 1065 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 SKIDA1Q1XH10 827 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 SLC45A4Q5BKX6 768 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 EMC10Q5UCC4 262 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 RFX8Q6ZV50 586 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 STKLD1Q8NE28 680 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 EPS8L3Q8TE67 593 aaKnown RBP23.07■■□□□ 1.28
SMAD1-201ENST00000302085 NOVA2Q9UNW9 492 aaKnown RBP23.07■■□□□ 1.28
SMAD1-201ENST00000302085 ALOX15BO15296 676 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 TBC1D4O60343 1298 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 UPP2O95045 317 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 IGLV3-25P01717 112 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 MAGEA11P43364 429 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 LMAN1P49257 510 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 EIF4EBP2Q13542 120 aaPredicted RBP23.07■■□□□ 1.28
SMAD1-201ENST00000302085 RTP2Q5QGT7 225 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 TTC9BQ8N6N2 239 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 OLFM3Q96PB7 478 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 QKIQ96PU8 341 aaKnown RBP eCLIP23.07■■□□□ 1.286e-6■■■■□ 20.5
SMAD1-201ENST00000302085 TRIM62Q9BVG3 475 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 ABCC13Q9NSE7 274 aa23.07■■□□□ 1.28
SMAD1-201ENST00000302085 ARPP19P56211 112 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 SKOR1P84550 965 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 ELAVL2Q12926 359 aaKnown RBP23.06■■□□□ 1.28
SMAD1-201ENST00000302085 IKBKEQ14164 716 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 ARL13BQ3SXY8 428 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 BTBD8Q5XKL5 378 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 KDM7AQ6ZMT4 941 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 LRRC43Q8N309 656 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 TLCD1Q96CP7 247 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 PGM2Q96G03 612 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 PKNOX2Q96KN3 472 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 TKTL2Q9H0I9 626 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 NMUR1Q9HB89 426 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 TMEM39AQ9NV64 488 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 PAK5Q9P286 719 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 SNX10Q9Y5X0 201 aa23.06■■□□□ 1.28
SMAD1-201ENST00000302085 ZNF638Q14966 1978 aaKnown RBP23.06■■□□□ 1.28
SMAD1-201ENST00000302085 SMIM23A6NLE4 172 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 RASGRF2O14827 1237 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 TRIM66O15016 1216 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 DCLK1O15075 740 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 MFSD11O43934 449 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 TMEM63AO94886 807 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 NR1D1P20393 614 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 HCAR3P49019 387 aa23.05■■□□□ 1.28
SMAD1-201ENST00000302085 BASP1P80723 227 aaKnown RBP23.05■■□□□ 1.28
SMAD1-201ENST00000302085 FASTKD3Q14CZ7 662 aaKnown RBP23.05■■□□□ 1.28
SMAD1-201ENST00000302085 HP1BP3Q5SSJ5 553 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms