RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 E7ENQ6 273 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 GPR32O75388 356 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 UPP2O95045 317 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 PFKMP08237 780 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 OLFML1Q6UWY5 402 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 TRABD2AQ86V40 505 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 CXorf38Q8TB03 319 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 GTF3C2Q8WUA4 911 aaPredicted RBP9.62□□□□□ -0.87
PRDM9-201ENST00000296682 RMDN2Q96LZ7 410 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 FAM193BQ96PV7 902 aaPredicted RBP9.62□□□□□ -0.87
PRDM9-201ENST00000296682 PRDM12Q9H4Q4 367 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 MIOSQ9NXC5 875 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 GABRQQ9UN88 632 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 UNCXA6NJT0 531 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 PGGT1BP53609 377 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 KCNJ2P63252 427 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 KLHL38Q2WGJ6 581 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 LGSNQ5TDP6 509 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 FAM117BQ6P1L5 589 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 SLC35F5Q8WV83 523 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 TFB1MQ8WVM0 346 aaKnown RBP9.62□□□□□ -0.87
PRDM9-201ENST00000296682 LRRC37BQ96QE4 947 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 ZNF395Q9H8N7 513 aaPredicted RBP9.62□□□□□ -0.87
PRDM9-201ENST00000296682 TRMT13Q9NUP7 481 aaKnown RBP9.62□□□□□ -0.87
PRDM9-201ENST00000296682 FAM105AQ9NUU6 356 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 CLUHO75153 1309 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 CXorf49A8MYA2 514 aaPredicted RBP9.61□□□□□ -0.87
PRDM9-201ENST00000296682 NRP1O14786 923 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 KRT37O76014 449 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 CBX6O95503 412 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 JCHAINP01591 159 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 TROVE2P10155 538 aaKnown RBP eCLIP9.61□□□□□ -0.87
PRDM9-201ENST00000296682 MGAT1P26572 445 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 SARNPP82979 210 aaKnown RBP9.61□□□□□ -0.87
PRDM9-201ENST00000296682 SEPT6Q14141 434 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 RASA2Q15283 850 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 STILQ15468 1287 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 PCSK7Q16549 785 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 EFHC1Q5JVL4 640 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 MFSD14CQ5VZR4 134 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 FAM228AQ86W67 206 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 METTL23Q86XA0 190 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 MIB1Q86YT6 1006 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 FUKQ8N0W3 1084 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 PLCD3Q8N3E9 789 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 ZNF317Q96PQ6 595 aaPredicted RBP9.61□□□□□ -0.87
PRDM9-201ENST00000296682 WDCPQ9H6R7 721 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 AGO3Q9H9G7 860 aaKnown RBP9.61□□□□□ -0.87
PRDM9-201ENST00000296682 PRM3Q9NNZ6 103 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 XPNPEP3Q9NQH7 507 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 ARL2BPQ9Y2Y0 163 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 FIS1Q9Y3D6 152 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 PATJQ8NI35 1801 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 AKR1A1P14550 325 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 PSMB4P28070 264 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 SLC10A2Q12908 348 aaPredicted RBP9.61□□□□□ -0.87
PRDM9-201ENST00000296682 NOMO1Q15155 1222 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 GDF6Q6KF10 455 aaPredicted RBP9.61□□□□□ -0.87
PRDM9-201ENST00000296682 RAPH1Q70E73 1250 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 CDKL3Q8IVW4 592 aaPredicted RBP9.61□□□□□ -0.87
PRDM9-201ENST00000296682 SCAMP5Q8TAC9 235 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 CKAP2Q8WWK9 683 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 B3GALT6Q96L58 329 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 CSPG4P5Q96PW8 444 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 KCTD15Q96SI1 283 aaPredicted RBP9.61□□□□□ -0.87
PRDM9-201ENST00000296682 SFMBT1Q9UHJ3 866 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 MYO7AQ13402 2215 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 SMIM35A0A1B0GVV1 85 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 DCAF8L1A6NGE4 600 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 NT5C1B-RDH14C9J2C7 533 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 RNF103O00237 685 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 F2P00734 622 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 ERVK-10P10266 1014 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 PBX3P40426 434 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 PDK2Q15119 407 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 PQLC3Q8N755 202 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 RNF139Q8WU17 664 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 PCED1BQ96HM7 432 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 NACA2Q9H009 215 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 PLEKHA5Q9HAU0 1116 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 RABGEF1Q9UJ41 708 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 L3MBTL1Q9Y468 752 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 RPS6KL1Q9Y6S9 549 aa9.61□□□□□ -0.87
PRDM9-201ENST00000296682 C3orf70A6NLC5 250 aaPredicted RBP9.6□□□□□ -0.87
PRDM9-201ENST00000296682 GOLGA8CPA6NN73 597 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 MSI1O43347 362 aaKnown RBP9.6□□□□□ -0.87
PRDM9-201ENST00000296682 TRPA1O75762 1119 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 GABBR2O75899 941 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 ASGR1P07306 291 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 NPR3P17342 541 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 TAC1P20366 129 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 PCK1P35558 622 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 FAM187BQ17R55 369 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 HTR3CQ8WXA8 447 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 FAM136AQ96C01 138 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 PLCD4Q9BRC7 762 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 KATNAL1Q9BW62 490 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 VRTNQ9H8Y1 702 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 ARMCX1Q9P291 453 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 PADI3Q9ULW8 664 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms