RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 TRIM66O15016 1216 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 ALBP02768 609 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 TCF3P15923 654 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 PTPRAP18433 802 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 AMPD1P23109 780 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 PSMA4P25789 261 aaKnown RBP17.74■□□□□ 0.43
SHANK1-201ENST00000293441 MRPL28Q13084 256 aaKnown RBP17.74■□□□□ 0.43
SHANK1-201ENST00000293441 REXO1L1PQ8IX06 675 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 PAWRQ96IZ0 340 aaKnown RBP17.74■□□□□ 0.43
SHANK1-201ENST00000293441 ELOVL4Q9GZR5 314 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 A1CFQ9NQ94 594 aaKnown RBP17.74■□□□□ 0.43
SHANK1-201ENST00000293441 NFASCO94856 1347 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 KIAA1210Q9ULL0 1709 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 NFYCQ13952 458 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 KHDRBS2Q5VWX1 349 aaKnown RBP17.74■□□□□ 0.43
SHANK1-201ENST00000293441 TPGS1Q6ZTW0 290 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 SERPINB11Q96P15 392 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 CAMKK2Q96RR4 588 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 KATNA1O75449 491 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 MCL1Q07820 350 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 EARS2Q5JPH6 523 aaKnown RBP17.74■□□□□ 0.43
SHANK1-201ENST00000293441 SEL1L3Q68CR1 1132 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 NT5DC4Q86YG4 428 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 PSMD12O00232 456 aaPredicted RBP17.74■□□□□ 0.43
SHANK1-201ENST00000293441 TNNI3P19429 210 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 WLSQ5T9L3 541 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 DAB2IPQ5VWQ8 1189 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 GLT6D1Q7Z4J2 308 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 CNBD2Q96M20 576 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 NAT9Q9BTE0 207 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 ELOVL6Q9H5J4 265 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 DNAJC16Q9Y2G8 782 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 RBAK-RBAKDNI3L0D1 243 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 MLH1P40692 756 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 TGM3Q08188 693 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 PREPLQ4J6C6 727 aaPredicted RBP17.74■□□□□ 0.43
SHANK1-201ENST00000293441 FBXW10Q5XX13 1052 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 MIEF1Q9NQG6 463 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 NUDT5Q9UKK9 219 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 RECQL4O94761 1208 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 RBP1P09455 135 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 CCDC159P0C7I6 412 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 RPS7P62081 194 aaKnown RBP17.73■□□□□ 0.43
SHANK1-201ENST00000293441 PPIL2Q13356 520 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 BOP1Q14137 746 aaKnown RBP17.73■□□□□ 0.43
SHANK1-201ENST00000293441 TDRD5Q8NAT2 981 aaKnown RBP17.73■□□□□ 0.43
SHANK1-201ENST00000293441 GAD1Q99259 594 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 ASB7Q9H672 318 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 ACTR8Q9H981 624 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 WDR41Q9HAD4 459 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 KRT84Q9NSB2 600 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 NCKAP1Q9Y2A7 1128 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 MROH7Q68CQ1 1323 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 CASZ1Q86V15 1759 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 A0A0A6YYK5 440 aaPredicted RBP17.73■□□□□ 0.43
SHANK1-201ENST00000293441 RASSF10A6NK89 507 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 CCT8L1PA6NM43 557 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 IGF2BP3O00425 579 aaKnown RBP eCLIP17.73■□□□□ 0.43
SHANK1-201ENST00000293441 YWHAZP63104 245 aaKnown RBP17.73■□□□□ 0.43
SHANK1-201ENST00000293441 RUNX1T1Q06455 604 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 DDR1Q08345 913 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 CXCL17Q6UXB2 119 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 LRRC34Q8IZ02 419 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 CDC42EP4Q9H3Q1 356 aaKnown RBP17.73■□□□□ 0.43
SHANK1-201ENST00000293441 PIF1Q9H611 641 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 DDX28Q9NUL7 540 aaKnown RBP17.73■□□□□ 0.43
SHANK1-201ENST00000293441 XPO1O14980 1071 aaKnown RBP17.73■□□□□ 0.43
SHANK1-201ENST00000293441 BMPR2Q13873 1038 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 DEFB106AQ8N104 65 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 COPS5Q92905 334 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 PPP1R10Q96QC0 940 aaKnown RBP17.73■□□□□ 0.43
SHANK1-201ENST00000293441 ACOT9Q9Y305 439 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 SLIT1O75093 1534 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 MST1RQ04912 1400 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 EML1O00423 815 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 USP1O94782 785 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 RRM2P31350 389 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 CCNG2Q16589 344 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 ZDHHC17Q8IUH5 632 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 PHF21BQ96EK2 531 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 IDI2Q9BXS1 227 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 FER1L4A9Z1Z3 1794 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 IGSF6O95976 241 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 CYP2A7P20853 494 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 MYBPC2Q14324 1141 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 SLC24A3Q9HC58 644 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 TRPC4Q9UBN4 977 aa17.73■□□□□ 0.43
SHANK1-201ENST00000293441 CLK1P49759 484 aaKnown RBP17.72■□□□□ 0.43
SHANK1-201ENST00000293441 SLC12A3P55017 1021 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 ZC4H2Q9NQZ6 224 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 RRN3Q9NYV6 651 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 BCL9O00512 1426 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 WDR27A2RRH5 827 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 YBX3P16989 372 aaKnown RBP eCLIP17.72■□□□□ 0.43
SHANK1-201ENST00000293441 CNTFP26441 200 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 KRT20P35900 424 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 GUCA1AP43080 201 aaPredicted RBP17.72■□□□□ 0.43
SHANK1-201ENST00000293441 RIN3Q8TB24 985 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 ACTL9Q8TC94 416 aa17.72■□□□□ 0.43
SHANK1-201ENST00000293441 ACTRT1Q8TDG2 376 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms