RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 TMEM154Q6P9G4 183 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 OSTM1Q86WC4 334 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 SLC35B2Q8TB61 432 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 FNIP1Q8TF40 1166 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 SLC35F5Q8WV83 523 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 TSC22D3Q99576 134 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 SYT15Q9BQS2 421 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 TMEM121Q9BTD3 319 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 SPC25Q9HBM1 224 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 KIAA1257Q9ULG3 409 aa18.97■□□□□ 0.63
PDLIM3-201ENST00000284767 EME2A4GXA9 379 aaPredicted RBP18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 TSHRP16473 764 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 THPOP40225 353 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 TAF6P49848 677 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 ARFIP2P53365 341 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 KRT72Q14CN4 511 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 DSTYKQ6XUX3 929 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 SERINC5Q86VE9 423 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 SKA1Q96BD8 255 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 TSSK1BQ9BXA7 367 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 FRMD8P1Q9BZ68 369 aaPredicted RBP18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 SENP6Q9GZR1 1112 aaPredicted RBP18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 UPF3AQ9H1J1 476 aaKnown RBP18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 FAM105AQ9NUU6 356 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 ARL8BQ9NVJ2 186 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 ASB3Q9Y575 518 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 A0A0G2JND7 137 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 WDR91A4D1P6 747 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 CFAP69A5D8W1 941 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 C2CD4BA6NLJ0 364 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 E7ESA3 106 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 GYG2O15488 501 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 PAPSS1O43252 624 aaPredicted RBP18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 IFNB1P01574 187 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 SKIP12755 728 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 TFE3P19532 575 aaPredicted RBP18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 CDK16Q00536 496 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 PLCB3Q01970 1234 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 RCN1Q15293 331 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 SNX30Q5VWJ9 437 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 SLC30A9Q6PML9 568 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 OLFML1Q6UWY5 402 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 CHSY1Q86X52 802 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 APPL2Q8NEU8 664 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 KHSRPQ92945 711 aaKnown RBP eCLIP18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 ADAM33Q9BZ11 813 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 USP18Q9UMW8 372 aa18.96■□□□□ 0.63
PDLIM3-201ENST00000284767 IL1BP01584 269 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 KDELR1P24390 212 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 TKTP29401 623 aaKnown RBP18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 SSTR1P30872 391 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 SARNPP82979 210 aaKnown RBP18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 SLC34A1Q06495 639 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 OVGP1Q12889 678 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 MMRN1Q13201 1228 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 EFTUD2Q15029 972 aaKnown RBP eCLIP18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 C3orf62Q6ZUJ4 267 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 TTC39CQ8N584 583 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 RNF169Q8NCN4 708 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 SLC2A14Q8TDB8 520 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 DCAKDQ8WVC6 231 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 PPP1R10Q96QC0 940 aaKnown RBP18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 HESX1Q9UBX0 185 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 GOLGA8MH3BSY2 632 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 SMAPO00193 183 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 KPNA6O60684 536 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 SMIM24O75264 130 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 BANF1O75531 89 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 GPD1P21695 349 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 SP100P23497 879 aaPredicted RBP18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 CD52P31358 61 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 TUBP50607 506 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 RABGGTBP53611 331 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 CYP4V2Q6ZWL3 525 aaPredicted RBP18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 POLNQ7Z5Q5 900 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 NAT8LQ8N9F0 302 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 MCUR1Q96AQ8 359 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 ZNF560Q96MR9 790 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 PAAF1Q9BRP4 392 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 SNX25Q9H3E2 840 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 TRMT13Q9NUP7 481 aaKnown RBP18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 EFR3BQ9Y2G0 817 aa18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 TIMM13Q9Y5L4 95 aaPredicted RBP18.95■□□□□ 0.62
PDLIM3-201ENST00000284767 CLDN5O00501 218 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 CST8O60676 142 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 RNF8O76064 485 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 PSMG1O95456 288 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 TRUB2O95900 331 aaKnown RBP18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 DHRS4L1P0CG22 281 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 LCP1P13796 627 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 ZNF143P52747 638 aaPredicted RBP18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 CCDC14Q49A88 953 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 ACSBG2Q5FVE4 666 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 FAM91A1Q658Y4 838 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 UNC93AQ86WB7 457 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 ADGRF2Q8IZF7 708 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 CPT1BQ92523 772 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 CALN1Q9BXU9 219 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 SLC4A5Q9BY07 1137 aa18.94■□□□□ 0.62
PDLIM3-201ENST00000284767 GPATCH2LQ9NWQ4 482 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 293.5 ms