RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 IFT122Q9HBG6 1241 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 PNPLA3Q9NST1 481 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 UCKL1Q9NWZ5 548 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 IKBKGQ9Y6K9 419 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 AKAP11Q9UKA4 1901 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 PSME4Q14997 1843 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 PCM1Q15154 2024 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 TNKSO95271 1327 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 SNAP23O00161 211 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 POLR1CO15160 346 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-201ENST00000274071 CAPN1P07384 714 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 TGFB3P10600 412 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 FGFR2P21802 821 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 EPHA3P29320 983 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 COPAP53621 1224 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 GALK2Q01415 458 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 PRKCQQ04759 706 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 UGT3A1Q6NUS8 523 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 IDO2Q6ZQW0 420 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 CPNE8Q86YQ8 564 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 CCDC28AQ8IWP9 274 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 CCDC33Q8N5R6 958 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 TRIB2Q92519 343 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 PKP2Q99959 881 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 EBF4Q9BQW3 602 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 TMEM79Q9BSE2 394 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 NPLQ9BXD5 320 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-201ENST00000274071 ZNF395Q9H8N7 513 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-201ENST00000274071 BLOC1S4Q9NUP1 217 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 THG1LQ9NWX6 298 aaKnown RBP9.5□□□□□ -0.89
PDGFC-201ENST00000274071 MARCOQ9UEW3 520 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-201ENST00000274071 CHORDC1Q9UHD1 332 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-201ENST00000274071 USP21Q9UK80 565 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 CFL2Q9Y281 166 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 RREB1Q92766 1687 aa9.5□□□□□ -0.89
PDGFC-201ENST00000274071 ASTN2O75129 1339 aaPredicted RBP9.49□□□□□ -0.89
PDGFC-201ENST00000274071 A0A087WXM4 84 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 ANKRD62A6NC57 917 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 ACOX3O15254 700 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 PRKAB2O43741 272 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 SGTAO43765 313 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 CLPXO76031 633 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 GSTM1P09488 218 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 CDH1P12830 882 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 KRT5P13647 590 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 PTGS2P35354 604 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 GRIA3P42263 894 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 MLLT6P55198 1093 aaPredicted RBP9.49□□□□□ -0.89
PDGFC-201ENST00000274071 STX1BP61266 288 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 RACK1P63244 317 aaKnown RBP9.49□□□□□ -0.89
PDGFC-201ENST00000274071 MRPS22P82650 360 aaKnown RBP9.49□□□□□ -0.89
PDGFC-201ENST00000274071 ECT2LQ008S8 904 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 MESDQ14696 234 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 UBE3CQ15386 1083 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 FAM47CQ5HY64 1035 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 ZFYVE27Q5T4F4 411 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 NXNQ6DKJ4 435 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 C11orf63Q6NUN7 778 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 NEK5Q6P3R8 708 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 LURAP1LQ8IV03 231 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 ASCC1Q8N9N2 400 aaKnown RBP9.49□□□□□ -0.89
PDGFC-201ENST00000274071 GLMNQ92990 594 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 CD101Q93033 1021 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 VMP1Q96GC9 406 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 AK8Q96MA6 479 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 FAM111AQ96PZ2 611 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 YME1L1Q96TA2 773 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 EMILIN2Q9BXX0 1053 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 ZNF717Q9BY31 904 aaPredicted RBP9.49□□□□□ -0.89
PDGFC-201ENST00000274071 VPS37BQ9H9H4 285 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 SLC24A2Q9UI40 661 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 PACSIN3Q9UKS6 424 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 STRIP2Q9ULQ0 834 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 TRIM77I1YAP6 450 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 PLOD2O00469 737 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 SNPHO15079 494 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 CCNT1O60563 726 aaKnown RBP9.49□□□□□ -0.89
PDGFC-201ENST00000274071 ENTPD3O75355 529 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 GPC4O75487 556 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 GCATO75600 419 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 UQCRFS1P1P0C7P4 283 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 MCF2P10911 925 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 CFL1P23528 166 aaKnown RBP9.49□□□□□ -0.89
PDGFC-201ENST00000274071 OPRL1P41146 370 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 RAB39AQ14964 217 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 TBC1D10BQ4KMP7 808 aaPredicted RBP9.49□□□□□ -0.89
PDGFC-201ENST00000274071 LDLRAP1Q5SW96 308 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 PXDC1Q5TGL8 231 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 IZUMO3Q5VZ72 239 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 LYPD8Q6UX82 237 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 SYDE1Q6ZW31 735 aaPredicted RBP9.49□□□□□ -0.89
PDGFC-201ENST00000274071 BLIDQ8IZY5 108 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 SIX6OS1Q8N1H7 587 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 C7orf57Q8NEG2 295 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 TNIP2Q8NFZ5 429 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 SGCDQ92629 289 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 GIMAP5Q96F15 307 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 TXNDC15Q96J42 360 aa9.49□□□□□ -0.89
PDGFC-201ENST00000274071 MAGEE1Q9HCI5 957 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms