RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 REPS2Q8NFH8 660 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 SEPHS2Q99611 448 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 ADGRE3Q9BY15 652 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 DCLK3Q9C098 648 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 ANKZF1Q9H8Y5 726 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 KRT84Q9NSB2 600 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 CEP170BQ9Y4F5 1589 aaPredicted RBP11.77□□□□□ -0.53
USP53-201ENST00000274030 SMIM22K7EJ46 135 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 WNT10BO00744 389 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 VIL1P09327 827 aaKnown RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 SLC2A4P14672 509 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 RPL21P46778 160 aaKnown RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 SLC26A2P50443 739 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 GLIS2Q9BZE0 524 aaPredicted RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 BATF3Q9NR55 127 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.76□□□□□ -0.53
USP53-201ENST00000274030 SNX8Q9Y5X2 465 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 RARAP10276 462 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 IL1R1P14778 569 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 PTENP60484 403 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 CSTF3Q12996 717 aaKnown RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 RMND5AQ9H871 391 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 NMRK1Q9NWW6 199 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 ITGA11Q9UKX5 1188 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 DSEQ9UL01 958 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 DRG1Q9Y295 367 aaKnown RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 AGRPO00253 132 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 VAPBO95292 243 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 PECAM1P16284 738 aaPredicted RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 ABCG1P45844 678 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 CBWD3Q5JTY5 395 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 CBWD5Q5RIA9 395 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 ZCCHC23Q6ZST2 131 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 DEFB107AQ8IZN7 70 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 DEFB106AQ8N104 65 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 TADA1Q96BN2 335 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 PPP1R10Q96QC0 940 aaKnown RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 DUSP9Q99956 384 aaKnown RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 OSBPL10Q9BXB5 764 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 SAE1Q9UBE0 346 aaPredicted RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 TRPC4Q9UBN4 977 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 DYRK1BQ9Y463 629 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 UNC13BO14795 1591 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 A0A0A6YYK5 440 aaPredicted RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 MEI4A8MW99 385 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 ANKRD63C9JTQ0 380 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 DDX3XO00571 662 aaKnown RBP eCLIP11.76□□□□□ -0.534e-7■■■□□ 17.9
USP53-201ENST00000274030 RAMP2O60895 175 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 RBP1P09455 135 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 ADORA2AP29274 412 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 GSSP48637 474 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 NCKAP1LP55160 1127 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 TBX4P57082 545 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 YWHAZP63104 245 aaKnown RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 C1QBPQ07021 282 aaKnown RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 BOP1Q14137 746 aaKnown RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 NFE2Q16621 373 aaPredicted RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 CBWD6Q4V339 395 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 ARRDC4Q8NCT1 418 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 SLC35C1Q96A29 364 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 FAR2Q96K12 515 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 FUCA2Q9BTY2 467 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 TLR8Q9NR97 1041 aaKnown RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 DNPEPQ9ULA0 475 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 RIPK2O43353 540 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 RNASEH1O60930 286 aaKnown RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 H2AFXP16104 143 aaPredicted RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 CCNG1P51959 295 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 AADACL2Q6P093 401 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 TRMT11Q7Z4G4 463 aaKnown RBP11.76□□□□□ -0.53
USP53-201ENST00000274030 CNPY4Q8N129 248 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 POU5F2Q8N7G0 328 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 GLIS3Q8NEA6 775 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 DNERQ8NFT8 737 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 TCP10LQ8TDR4 215 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 ATP13A1Q9HD20 1204 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 SH3BP4Q9P0V3 963 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 SNCAIPQ9Y6H5 919 aa11.76□□□□□ -0.53
USP53-201ENST00000274030 SAC3D1A6NKF1 404 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 SERPINF2P08697 491 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 HSMCR30P0CW71 290 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 ADCYAP1R1P41586 468 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 IFI35P80217 286 aaPredicted RBP11.75□□□□□ -0.53
USP53-201ENST00000274030 BEX3Q00994 111 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 ZCWPW2Q504Y3 356 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 ARHGAP17Q68EM7 881 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 DNAJC14Q6Y2X3 702 aaPredicted RBP11.75□□□□□ -0.53
USP53-201ENST00000274030 RIPOR1Q6ZS17 1223 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 RBM43Q6ZSC3 357 aaKnown RBP11.75□□□□□ -0.53
USP53-201ENST00000274030 TRPC4APQ8TEL6 797 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 KAT5Q92993 513 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 APBA2Q99767 749 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 PCDH9Q9HC56 1237 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 LRRC4BQ9NT99 713 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 CTNNAL1Q9UBT7 734 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 LNPEPQ9UIQ6 1025 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 UBDO15205 165 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 USP17L7P0C7H9 530 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 CKBP12277 381 aa11.75□□□□□ -0.53
USP53-201ENST00000274030 ALDH5A1P51649 535 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms