RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 CPSF3Q9UKF6 684 aaKnown RBP16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 C22orf31O95567 290 aa16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 HOXC6P09630 235 aa16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 DGKDQ16760 1214 aa16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MARCH8Q5T0T0 291 aa16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CYP4A22Q5TCH4 519 aa16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 IQSEC1Q6DN90 963 aa16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 C3orf62Q6ZUJ4 267 aa16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 RASSF3Q86WH2 238 aa16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ALLCQ8N6M5 410 aa16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PYROXD1Q8WU10 500 aa16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SLC35B4Q969S0 331 aa16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CPB2Q96IY4 423 aa16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TUBGCP4Q9UGJ1 667 aa16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PAIP2BQ9ULR5 123 aaKnown RBP16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PLA2G4CQ9UP65 541 aa16.51■□□□□ 0.23
MAP1LC3B-201ENST00000268607 IGKV6-21A0A0C4DH24 114 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PSTPIP1O43586 416 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 BUD23O43709 281 aaKnown RBP16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 HBP1O60381 514 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TM7SF2O76062 418 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TGDSO95455 350 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PTP4A2Q12974 167 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 NFX1Q12986 1120 aaKnown RBP16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TRMT5Q32P41 509 aaKnown RBP16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MSS51Q4VC12 460 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ACAD11Q709F0 780 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ZNF554Q86TJ5 538 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 KATNAL2Q8IYT4 538 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 APBA2Q99767 749 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TMEM121Q9BTD3 319 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PPCSQ9HAB8 311 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ARHGEF38Q9NXL2 777 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CCND3P30281 292 aaPredicted RBP16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 GRIK4Q16099 956 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 HIF1AQ16665 826 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ZNF699Q32M78 642 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TMEM259Q4ZIN3 620 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 DGCR14Q96DF8 476 aaKnown RBP16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PPARGC1AQ9UBK2 798 aaKnown RBP16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TJP2Q9UDY2 1190 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SH3GLB1Q9Y371 365 aa16.5■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CAPN14A8MX76 684 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 GPR25O00155 361 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ATP9BO43861 1147 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CDK4P11802 303 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CD19P15391 556 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 FNBP1LQ5T0N5 605 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MPZL3Q6UWV2 235 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CXCL17Q6UXB2 119 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 DNAJC14Q6Y2X3 702 aaPredicted RBP16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 OR6Y1Q8NGX8 325 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 EXD1Q8NHP7 514 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 DCAKDQ8WVC6 231 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MTBPQ96DY7 904 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MCEEQ96PE7 176 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PCDH18Q9HCL0 1135 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PTTG2Q9NZH5 202 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SMIM31A0A1B0GVY4 71 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CCDC160A6NGH7 325 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 F8VP50 259 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ACKR2O00590 384 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 VILLO15195 856 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PLCB3Q01970 1234 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SULT2A1Q06520 285 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MED21Q13503 144 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SFT2D3Q587I9 215 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 GNASQ5JWF2 1037 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 LPCAT4Q643R3 524 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PYDC1Q8WXC3 89 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TRIM11Q96F44 468 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SERAC1Q96JX3 654 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 NIF3L1Q9GZT8 377 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CDT1Q9H211 546 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 C10orf88Q9H8K7 445 aa16.49■□□□□ 0.23
MAP1LC3B-201ENST00000268607 RANBP2P49792 3224 aaKnown RBP16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SGK1O00141 431 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 STK10O94804 968 aaKnown RBP16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MT-ND3P03897 115 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 VARSP26640 1264 aaKnown RBP16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ETV4P43268 484 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 APLP1P51693 650 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ZNF132P52740 706 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 FCGRTP55899 365 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SP3Q02447 781 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 HSF5Q4G112 596 aaPredicted RBP16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ANKRD22Q5VYY1 191 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TXNRD3NBQ6F5E7 133 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PLEKHA7Q6IQ23 1121 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MFSD7Q6UXD7 560 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ISLR2Q6UXK2 745 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 DPH6Q7L8W6 267 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PDSS2Q86YH6 399 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PHF13Q86YI8 300 aaPredicted RBP16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 WDTC1Q8N5D0 677 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 GSTCDQ8NEC7 633 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 FEZF2Q8TBJ5 459 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 KCNN1Q92952 543 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 WDR83Q9BRX9 315 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms