RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 NR2C2P49116 596 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 RPL10AP62906 217 aaKnown RBP16.97■□□□□ 0.31
TPM1-201ENST00000267996 HTRA4P83105 476 aaPredicted RBP16.97■□□□□ 0.31
TPM1-201ENST00000267996 CAV1Q03135 178 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 DUSP4Q13115 394 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 CALCOCO2Q13137 446 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 ALS2CLQ60I27 953 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 C1orf228Q6PIY5 440 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 DENND5BQ6ZUT9 1274 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 OTOP2Q7RTS6 562 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 IQCKQ8N0W5 287 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 BBOF1Q8ND07 529 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 RNF139Q8WU17 664 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 CLSTN3Q9BQT9 956 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 ACBD3Q9H3P7 528 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 OSER1Q9NX31 292 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 MTRF1LQ9UGC7 380 aaKnown RBP16.97■□□□□ 0.31
TPM1-201ENST00000267996 MYO16Q9Y6X6 1858 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 YWHAQP27348 245 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 OR1D2P34982 312 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 HCAR3P49019 387 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 ZNF135P52742 658 aaPredicted RBP16.97■□□□□ 0.31
TPM1-201ENST00000267996 IFRD2Q12894 506 aaPredicted RBP16.97■□□□□ 0.31
TPM1-201ENST00000267996 DPYSQ14117 519 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 ARL13BQ3SXY8 428 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 MGAT5BQ3V5L5 792 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 SPDYCQ5MJ68 293 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 KIAA1841Q6NSI8 718 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 DDX53Q86TM3 631 aaKnown RBP16.97■□□□□ 0.31
TPM1-201ENST00000267996 PRUNE1Q86TP1 453 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 GPR65Q8IYL9 337 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 YME1L1Q96TA2 773 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 WDCPQ9H6R7 721 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 ARHGEF4Q9NR80 690 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 PCDH10Q9P2E7 1040 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 HSFX1Q9UBD0 423 aa16.97■□□□□ 0.31
TPM1-201ENST00000267996 ZNF638Q14966 1978 aaKnown RBP16.96■□□□□ 0.31
TPM1-201ENST00000267996 AGPSO00116 658 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 SGK1O00141 431 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 SOAT2O75908 522 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 ABLIM3O94929 683 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 FGBP02675 491 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 ZSCAN5DPP0CG00 497 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 ETS1P14921 441 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 AMPD1P23109 780 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 STIP1P31948 543 aaKnown RBP16.96■□□□□ 0.31
TPM1-201ENST00000267996 GLUD2P49448 558 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 ITGA8P53708 1063 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 XRCC4Q13426 336 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 UAP1Q16222 522 aaPredicted RBP16.96■□□□□ 0.31
TPM1-201ENST00000267996 BRMS1LQ5PSV4 323 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 NCBP2-AS2Q69YL0 99 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 UNC45BQ8IWX7 931 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 KRT222Q8N1A0 295 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 STKLD1Q8NE28 680 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 CASP10Q92851 521 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 SEPT5Q99719 369 aaPredicted RBP16.96■□□□□ 0.31
TPM1-201ENST00000267996 TTLL2Q9BWV7 592 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 ADAM7Q9H2U9 754 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 USP29Q9HBJ7 922 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 ARHGEF38Q9NXL2 777 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 CLIC5Q9NZA1 410 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 GMIPQ9P107 970 aa16.96■□□□□ 0.31
TPM1-201ENST00000267996 AFF4Q9UHB7 1163 aaKnown RBP16.96■□□□□ 0.31
TPM1-201ENST00000267996 BCLAF3A2AJT9 711 aaKnown RBP16.95■□□□□ 0.3
TPM1-201ENST00000267996 DNALI1O14645 258 aaPredicted RBP16.95■□□□□ 0.3
TPM1-201ENST00000267996 GJB5O95377 273 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 LINC00271P0C7V0 271 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 RPL17P18621 184 aaKnown RBP16.95■□□□□ 0.3
TPM1-201ENST00000267996 ATF6P18850 670 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 PPM1AP35813 382 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 HSD17B3P37058 310 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 TUFMP49411 452 aaKnown RBP16.95■□□□□ 0.3
TPM1-201ENST00000267996 VPS41P49754 854 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 GDF10P55107 478 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 GBE1Q04446 702 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 FPGSQ05932 587 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 DHX9Q08211 1270 aaKnown RBP16.95■□□□□ 0.3
TPM1-201ENST00000267996 SLC10A2Q12908 348 aaPredicted RBP16.95■□□□□ 0.3
TPM1-201ENST00000267996 TPGS2Q68CL5 300 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 HIBCHQ6NVY1 386 aaPredicted RBP16.95■□□□□ 0.3
TPM1-201ENST00000267996 GPR152Q8TDT2 470 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 RSAD2Q8WXG1 361 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 BADQ92934 168 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 RTP4Q96DX8 246 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 TKTL2Q9H0I9 626 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 OSBPL2Q9H1P3 480 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 C10orf88Q9H8K7 445 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 ETNK2Q9NVF9 386 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 ANAPC5Q9UJX4 755 aa16.95■□□□□ 0.3
TPM1-201ENST00000267996 CFAP69A5D8W1 941 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 GOLGA6BA6NDN3 693 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 SPDYE4A6NLX3 237 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 FAM72CH0Y354 149 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 DCLK1O15075 740 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 ZDHHC11BP0C7U3 371 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 PSEN1P49768 467 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 MTMR3Q13615 1198 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 PPP2R5DQ14738 602 aa16.94■□□□□ 0.3
TPM1-201ENST00000267996 PAFAH1B3Q15102 231 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms