RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 LRRC36Q1X8D7 754 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 UGT3A1Q6NUS8 523 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 MFN1Q8IWA4 741 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 TMEM169Q96HH4 297 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 CELF6Q96J87 481 aaKnown RBP17.2■□□□□ 0.34
PHRF1-201ENST00000264555 SENP8Q96LD8 212 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 VAT1Q99536 393 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 GPR20Q99678 358 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 MGEA5O60502 916 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 SMIM10L2AP0DMW4 78 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 SMIM10L2BP0DMW5 78 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 PTPN1P18031 435 aaKnown RBP17.2■□□□□ 0.34
PHRF1-201ENST00000264555 MGAT1P26572 445 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 AKT1P31749 480 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 FAAP100Q0VG06 881 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 CDH18Q13634 790 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 SEPT8Q92599 483 aa17.2■□□□□ 0.34
PHRF1-201ENST00000264555 C2CD2LO14523 706 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 TAS2R40P59535 323 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 NAB1Q13506 487 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 FOXR1Q6PIV2 292 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 LRRC57Q8N9N7 239 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 TMEM51Q9NW97 253 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 TAGLN3Q9UI15 199 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 MOSPD1Q9UJG1 213 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 SALL4Q9UJQ4 1053 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 DGKIO75912 1065 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 LTFP02788 710 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 ICAM3P32942 547 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 ARHGEF7Q14155 803 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 PDCD2Q16342 344 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-201ENST00000264555 SLC35G1Q2M3R5 365 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 SEL1L3Q68CR1 1132 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 RNF157Q96PX1 679 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 PCDHB5Q9Y5E4 795 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 TCHHQ07283 1943 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 SUPT7LO94864 414 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 C4BPAP04003 597 aaKnown RBP17.19■□□□□ 0.34
PHRF1-201ENST00000264555 TSHRP16473 764 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 OXCT1P55809 520 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 ST8SIA6P61647 398 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 AARS2Q5JTZ9 985 aaKnown RBP17.19■□□□□ 0.34
PHRF1-201ENST00000264555 IQCKQ8N0W5 287 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 ZNF75CPQ92670 426 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-201ENST00000264555 WNT8BQ93098 351 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 CASS4Q9NQ75 786 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 CTNNAL1Q9UBT7 734 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-201ENST00000264555 B4GALT4O60513 344 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 ALDH2P05091 517 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 RBP1P09455 135 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 ALADP13716 330 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 RPL22P35268 128 aaKnown RBP17.19■□□□□ 0.34
PHRF1-201ENST00000264555 GLRBP48167 497 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 CCDC153Q494R4 210 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 N4BP2L1Q5TBK1 243 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-201ENST00000264555 CPNE1Q99829 537 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 LHX5Q9H2C1 402 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 CD248Q9HCU0 757 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 NT5MQ9NPB1 228 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 TLR8Q9NR97 1041 aaKnown RBP17.19■□□□□ 0.34
PHRF1-201ENST00000264555 TRMT6Q9UJA5 497 aaKnown RBP17.19■□□□□ 0.34
PHRF1-201ENST00000264555 ARHGAP10A1A4S6 786 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 KLRG2A4D1S0 409 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-201ENST00000264555 TMEM191CA6NGB0 347 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 GRM5P41594 1212 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 NUDT2P50583 147 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 CDK16Q00536 496 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 SPDYAQ5MJ70 313 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 MARC1Q5VT66 337 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 ANKRD52Q8NB46 1076 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 SERPINB11Q96P15 392 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 ULBP1Q9BZM6 244 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 STARD7Q9NQZ5 370 aa17.19■□□□□ 0.34
PHRF1-201ENST00000264555 MAFBQ9Y5Q3 323 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-201ENST00000264555 YBX3P16989 372 aaKnown RBP eCLIP17.18■□□□□ 0.34
PHRF1-201ENST00000264555 PARP6Q2NL67 630 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 ADAM32Q8TC27 787 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 EME1Q96AY2 570 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 XPNPEP3Q9NQH7 507 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 TRPM5Q9NZQ8 1165 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 KCNK1O00180 336 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 GJB1P08034 283 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 MMP8P22894 467 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 DNAJB2P25686 324 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 ARL2P36404 184 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 BEX3Q00994 111 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 MTA1Q13330 715 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 SYTL3Q4VX76 610 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 C6orf10Q5SRN2 563 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 CKAP2Q8WWK9 683 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 GAD1Q99259 594 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 GPBP1L1Q9HC44 474 aaPredicted RBP17.18■□□□□ 0.34
PHRF1-201ENST00000264555 PCDHGB4Q9UN71 923 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 ZNF142P52746 1687 aaPredicted RBP17.18■□□□□ 0.34
PHRF1-201ENST00000264555 RENBPP51606 427 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 HSDL1Q3SXM5 330 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 TMEM259Q4ZIN3 620 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 THEMIS2Q5TEJ8 643 aa17.18■□□□□ 0.34
PHRF1-201ENST00000264555 GPR142Q7Z601 462 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms