RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 MGAT4DA6NG13 374 aa13.2□□□□□ -0.3
TTC39A-202ENST00000262676 IRF6O14896 467 aa13.2□□□□□ -0.3
TTC39A-202ENST00000262676 CDC40O60508 579 aaKnown RBP eCLIP13.2□□□□□ -0.3
TTC39A-202ENST00000262676 ADCYAP1R1P41586 468 aa13.2□□□□□ -0.3
TTC39A-202ENST00000262676 GPR1P46091 355 aa13.2□□□□□ -0.3
TTC39A-202ENST00000262676 BCAP31P51572 246 aa13.2□□□□□ -0.3
TTC39A-202ENST00000262676 RBP5P82980 135 aa13.2□□□□□ -0.3
TTC39A-202ENST00000262676 PPIDQ08752 370 aaKnown RBP13.2□□□□□ -0.3
TTC39A-202ENST00000262676 GDPD5Q8WTR4 605 aa13.2□□□□□ -0.3
TTC39A-202ENST00000262676 MKNK1Q9BUB5 465 aa13.2□□□□□ -0.3
TTC39A-202ENST00000262676 IARS2Q9NSE4 1012 aaKnown RBP13.2□□□□□ -0.3
TTC39A-202ENST00000262676 BTBD7Q9P203 1132 aa13.2□□□□□ -0.3
TTC39A-202ENST00000262676 TFR2Q9UP52 801 aa13.2□□□□□ -0.3
TTC39A-202ENST00000262676 E9PCH4 1651 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 A0A1W2PRG6 482 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 RNASEH1O60930 286 aaKnown RBP13.19□□□□□ -0.3
TTC39A-202ENST00000262676 ENDOD1O94919 500 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 MBL2P11226 248 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-202ENST00000262676 GTF2E2P29084 291 aaKnown RBP13.19□□□□□ -0.3
TTC39A-202ENST00000262676 ERVK-9P63128 1117 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 ERVK-24P63145 666 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 ITGADQ13349 1161 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 DGUOKQ16854 277 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 CXCL17Q6UXB2 119 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 RIPOR1Q6ZS17 1223 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 UNKQ9C0B0 810 aaKnown RBP13.19□□□□□ -0.3
TTC39A-202ENST00000262676 PCDHGA4Q9Y5G9 962 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 FAM220BPB1ANY3 271 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 PTGES3LE9PB15 166 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 GLRA3O75311 464 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 BAIAP3O94812 1187 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 CAMK2GQ13555 558 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-202ENST00000262676 RASA2Q15283 850 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 KYAT1Q16773 422 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 TMED8Q6PL24 325 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-202ENST00000262676 CASP12Q6UXS9 341 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 SERPINB12Q96P63 405 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 PRRG3Q9BZD7 231 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 RIBC2Q9H4K1 309 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 NMRK1Q9NWW6 199 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 SPACA6W5XKT8 324 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 TRPM1Q7Z4N2 1603 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 SLC16A3O15427 465 aaKnown RBP13.19□□□□□ -0.3
TTC39A-202ENST00000262676 HS6ST1O60243 411 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 KLRC1P26715 233 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 EPC2Q52LR7 807 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 EFHC1Q5JVL4 640 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 CASKIN2Q8WXE0 1202 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 WDR35Q9P2L0 1181 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 PAX7P23759 505 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 RALGDSQ12967 914 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 TSNQ15631 228 aaKnown RBP13.19□□□□□ -0.3
TTC39A-202ENST00000262676 NDUFAF6Q330K2 333 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 SEL1L3Q68CR1 1132 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 ZNF438Q7Z4V0 828 aa13.19□□□□□ -0.3
TTC39A-202ENST00000262676 PRCCQ92733 491 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-202ENST00000262676 FAM120BQ96EK7 910 aaKnown RBP13.19□□□□□ -0.3
TTC39A-202ENST00000262676 A0A087X0T9 212 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 ZW10O43264 779 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 IDH3BO43837 385 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 TSPAN19P0C672 248 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 MAPK1P28482 360 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 CCZ1BP86790 482 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 CCZ1P86791 482 aaPredicted RBP13.18□□□□□ -0.3
TTC39A-202ENST00000262676 NAPEPLDQ6IQ20 393 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 KIAA0408Q6ZU52 694 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 MMGT1Q8N4V1 131 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 USP38Q8NB14 1042 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 PCDHAC2Q9Y5I4 1007 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 FAM205CA6NFA0 338 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 TBC1D12O60347 775 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 CALB2P22676 271 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 FMO5P49326 533 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 RHAGQ02094 409 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 CENPCQ03188 943 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 FMR1Q06787 632 aaKnown RBP eCLIP13.18□□□□□ -0.3
TTC39A-202ENST00000262676 RABL6Q3YEC7 729 aaPredicted RBP13.18□□□□□ -0.3
TTC39A-202ENST00000262676 SVOPQ8N4V2 548 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 TRAPPC9Q96Q05 1148 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 PSMD11O00231 422 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 MAP3K6O95382 1288 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 ALDH9A1P49189 494 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 ORC1Q13415 861 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 NAB2Q15742 525 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 FSCN1Q16658 493 aaKnown RBP13.18□□□□□ -0.3
TTC39A-202ENST00000262676 CTXN3Q4LDR2 81 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 VPS33AQ96AX1 596 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 PPP1R2P1Q96PQ5 205 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 GAS2L1Q99501 681 aaPredicted RBP13.18□□□□□ -0.3
TTC39A-202ENST00000262676 SLITRK2Q9H156 845 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 RSAD1Q9HA92 442 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 TUFT1Q9NNX1 390 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.18□□□□□ -0.3
TTC39A-202ENST00000262676 EHD3Q9NZN3 535 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 RWDD3Q9Y3V2 267 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.18□□□□□ -0.3
TTC39A-202ENST00000262676 UCHL3P15374 230 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 PDIA6Q15084 440 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 KCNT1Q5JUK3 1230 aa13.18□□□□□ -0.3
TTC39A-202ENST00000262676 ZNF671Q8TAW3 534 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms