RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 PLD4Q96BZ4 506 aa17.67■□□□□ 0.42
CGREF1-201ENST00000260595 ERLEC1Q96DZ1 483 aa17.67■□□□□ 0.42
CGREF1-201ENST00000260595 PIWIL1Q96J94 861 aaKnown RBP17.67■□□□□ 0.42
CGREF1-201ENST00000260595 LRRC4Q9HBW1 653 aa17.67■□□□□ 0.42
CGREF1-201ENST00000260595 PILRBQ9UKJ0 227 aa17.67■□□□□ 0.42
CGREF1-201ENST00000260595 NUP205Q92621 2012 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 AP5Z1O43299 807 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 SETSIPP0DME0 302 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 ITPKAP23677 461 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 RPL6Q02878 288 aaKnown RBP17.66■□□□□ 0.42
CGREF1-201ENST00000260595 MORC3Q14149 939 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 TMEM270Q6UE05 265 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 SLC36A4Q6YBV0 504 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 FMNL3Q8IVF7 1028 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 DEFB119Q8N690 84 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 SLC35F5Q8WV83 523 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 MRGPRX1Q96LB2 322 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 NT5C1BQ96P26 610 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 SLC6A17Q9H1V8 727 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 CD93Q9NPY3 652 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 TMEM9BQ9NQ34 198 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 OLA1Q9NTK5 396 aaKnown RBP17.66■□□□□ 0.42
CGREF1-201ENST00000260595 THAP10Q9P2Z0 257 aaPredicted RBP17.66■□□□□ 0.42
CGREF1-201ENST00000260595 SFMBT1Q9UHJ3 866 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 STON1Q9Y6Q2 735 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 LAMA1P25391 3075 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 PLXND1Q9Y4D7 1925 aa17.66■□□□□ 0.42
CGREF1-201ENST00000260595 P4HA2O15460 535 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 ZNF217O75362 1048 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 DAOAP59103 153 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 CNGA2Q16280 664 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 CCDC40Q4G0X9 1142 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 DAB2IPQ5VWQ8 1189 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 KLHL10Q6JEL2 608 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 PSAPL1Q6NUJ1 521 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 PMF1Q6P1K2 205 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 SLC23A3Q6PIS1 610 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 NELFBQ8WX92 580 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 EDEM1Q92611 657 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 IPO9Q96P70 1041 aaKnown RBP17.65■□□□□ 0.42
CGREF1-201ENST00000260595 CNGB3Q9NQW8 809 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 STOML2Q9UJZ1 356 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.65■□□□□ 0.42
CGREF1-201ENST00000260595 HBS1LQ9Y450 684 aaKnown RBP17.65■□□□□ 0.42
CGREF1-201ENST00000260595 PCDHB4Q9Y5E5 795 aa17.65■□□□□ 0.42
CGREF1-201ENST00000260595 ATXN2Q99700 1313 aaKnown RBP17.65■□□□□ 0.42
CGREF1-201ENST00000260595 TNRC6BQ9UPQ9 1833 aaKnown RBP17.64■□□□□ 0.41
CGREF1-201ENST00000260595 GIPC1O14908 333 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 NPC1O15118 1278 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 ZBTB24O43167 697 aaPredicted RBP17.64■□□□□ 0.41
CGREF1-201ENST00000260595 GADD45BO75293 160 aaPredicted RBP17.64■□□□□ 0.41
CGREF1-201ENST00000260595 CALCAP01258 141 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 CYBBP04839 570 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 HOXD12P35452 270 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 DPP6P42658 865 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 IL12RB1P42701 662 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 SHC2P98077 582 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 ZNF33AQ06730 810 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 LMAN2Q12907 356 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 FUT11Q495W5 492 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 TMEM215Q68D42 235 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 SLC41A1Q8IVJ1 513 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 TRIM59Q8IWR1 403 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 SIX6OS1Q8N1H7 587 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 PPM1KQ8N3J5 372 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 DDI1Q8WTU0 396 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 RNF139Q8WU17 664 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 NUSAP1Q9BXS6 441 aaKnown RBP17.64■□□□□ 0.41
CGREF1-201ENST00000260595 SLC2A11Q9BYW1 496 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 ABCC13Q9NSE7 274 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 ELOVL2Q9NXB9 296 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 CYP8B1Q9UNU6 501 aa17.64■□□□□ 0.41
CGREF1-201ENST00000260595 LCP1P13796 627 aa17.63■□□□□ 0.41
CGREF1-201ENST00000260595 ENGP17813 658 aa17.63■□□□□ 0.41
CGREF1-201ENST00000260595 BRD2P25440 801 aaKnown RBP17.63■□□□□ 0.41
CGREF1-201ENST00000260595 HOXD9P28356 352 aaPredicted RBP17.63■□□□□ 0.41
CGREF1-201ENST00000260595 HARS2P49590 506 aaKnown RBP17.63■□□□□ 0.41
CGREF1-201ENST00000260595 RGS7P49802 495 aa17.63■□□□□ 0.41
CGREF1-201ENST00000260595 NOVA1P51513 510 aaKnown RBP17.63■□□□□ 0.41
CGREF1-201ENST00000260595 ZNF132P52740 706 aa17.63■□□□□ 0.41
CGREF1-201ENST00000260595 MARSP56192 900 aaKnown RBP17.63■□□□□ 0.41
CGREF1-201ENST00000260595 MPPE1Q53F39 396 aa17.63■□□□□ 0.41
CGREF1-201ENST00000260595 MSANTD2Q6P1R3 559 aa17.63■□□□□ 0.41
CGREF1-201ENST00000260595 RRAGAQ7L523 313 aa17.63■□□□□ 0.41
CGREF1-201ENST00000260595 ANKS1BQ7Z6G8 1248 aa17.63■□□□□ 0.41
CGREF1-201ENST00000260595 METTL3Q86U44 580 aaKnown RBP17.63■□□□□ 0.41
CGREF1-201ENST00000260595 ARHGEF19Q8IW93 802 aa17.63■□□□□ 0.41
CGREF1-201ENST00000260595 EHBP1Q8NDI1 1231 aa17.63■□□□□ 0.41
CGREF1-201ENST00000260595 ZNF419Q96HQ0 510 aaPredicted RBP17.63■□□□□ 0.41
CGREF1-201ENST00000260595 MKRN2Q9H000 416 aaKnown RBP17.63■□□□□ 0.41
CGREF1-201ENST00000260595 CTNND2Q9UQB3 1225 aa17.63■□□□□ 0.41
CGREF1-201ENST00000260595 CNOT1A5YKK6 2376 aaKnown RBP17.62■□□□□ 0.41
CGREF1-201ENST00000260595 BICDL2A1A5D9 508 aa17.62■□□□□ 0.41
CGREF1-201ENST00000260595 BIN1O00499 593 aa17.62■□□□□ 0.41
CGREF1-201ENST00000260595 MSI1O43347 362 aaKnown RBP17.62■□□□□ 0.41
CGREF1-201ENST00000260595 CSRP1P21291 193 aaKnown RBP17.62■□□□□ 0.41
CGREF1-201ENST00000260595 STX17P56962 302 aa17.62■□□□□ 0.41
CGREF1-201ENST00000260595 GCNT1Q02742 428 aa17.62■□□□□ 0.41
CGREF1-201ENST00000260595 KCNH2Q12809 1159 aa17.62■□□□□ 0.41
CGREF1-201ENST00000260595 ZNF234Q14588 700 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms